David J. Wild

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Ying DingBill & Lewis Suit Professor, School of Information, Dell Med, University of Texas at AustinVerified email at austin.utexas.edu
Bin ChenMichigan State UniversityVerified email at hc.msu.edu
Rajarshi GuhaVertex PharmaceuticalsVerified email at vrtx.com
Peter WillettEmeritus professor, University of SheffieldVerified email at sheffield.ac.uk
Geoffrey FoxProfessor of Computer Science, University of Virginia, Biocomplexity InstituteVerified email at virginia.edu
Marlon PierceIndiana UniversityVerified email at iu.edu
ABHIK SEALx-Abbvie/Indiana UniversityVerified email at iu.edu
Philip S. YuProfessor of Computer Science, University of Illinons at ChicagoVerified email at cs.uic.edu
Xiangnan KongWorcester Polytechnic InstituteVerified email at wpi.edu
Egon WillighagenBiGCaT, NUTRIM, Maastricht University/NL, ORCID:0000-0001-7542-0286, https://social.edu.nl/@egonwVerified email at maastrichtuniversity.nl
Tang JieProfessor, Tsinghua UniversityVerified email at tsinghua.edu.cn
Lee HarlandFounder, SciBite LimitedVerified email at scibite.com
Amit ShethDirector, AI Institute; NCR Chair, U. of South CarolinaVerified email at sc.edu
Seung-Hee BaeIntelVerified email at intel.com
Jong Youl ChoiOak Ridge National LaboratoryVerified email at ornl.gov
Noel M. O'BoyleComputational Chemist, Sosei Heptares, Cambridge, UKVerified email at soseiheptares.com
Christoph SteinbeckFriedrich-Schiller-University JenaVerified email at uni-jena.de
Michel DumontierDistinguished Professor of Data Science, Maastricht UniversityVerified email at maastrichtuniversity.nl
Baik, Mu-HyunKAIST - Korea Advanced Institute of Science and TechnologyVerified email at kaist.ac.kr
Judy FoxAssociate Professor of Data Science, University of VirginiaVerified email at virginia.edu

David J. Wild

Professor of Informatics, Indiana University

Verified email at indiana.edu - Homepage

Data Science Network Biology Semantic Technologies Cheminformatics


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Chem2Bio2RDF: a semantic framework for linking and data mining chemogenomic and systems chemical biology data B Chen, X Dong, D Jiao, H Wang, Q Zhu, Y Ding, DJ Wild BMC bioinformatics 11 (1), 1-13, 2010	269	2010
Assessing drug target association using semantic linked data B Chen, Y Ding, DJ Wild PLoS computational biology 8 (7), e1002574, 2012	185	2012
PubChem as a source of polypharmacology B Chen, D Wild, R Guha Journal of chemical information and modeling 49 (9), 2044-2055, 2009	166	2009
Meta path-based collective classification in heterogeneous information networks X Kong, PS Yu, Y Ding, DJ Wild Proceedings of the 21st ACM international conference on Information and …, 2012	165	2012
The ChEMBL database as linked open data EL Willighagen, A Waagmeester, O Spjuth, P Ansell, AJ Williams, ... Journal of cheminformatics 5 (1), 1-12, 2013	140	2013
Comparison of 2D fingerprint types and hierarchy level selection methods for structural grouping using Ward's clustering DJ Wild, CJ Blankley Journal of Chemical Information and Computer Sciences 40 (1), 155-162, 2000	117	2000
Similarity searching in files of three-dimensional chemical structures. Alignment of molecular electrostatic potential fields with a genetic algorithm DJ Wild, P Willett Journal of Chemical Information and Computer Sciences 36 (2), 159-167, 1996	114	1996
Finding complex biological relationships in recent PubMed articles using Bio-LDA H Wang, Y Ding, J Tang, X Dong, B He, J Qiu, DJ Wild PloS one 6 (3), e17243, 2011	93	2011
Similarity searching in files of three-dimensional chemical structures: flexible field-based searching of molecular electrostatic potentials DA Thorner, DJ Wild, P Willett, PM Wright Journal of chemical information and computer sciences 36 (4), 900-908, 1996	87	1996
Systems chemical biology and the Semantic Web: what they mean for the future of drug discovery research DJ Wild, Y Ding, AP Sheth, L Harland, EM Gifford, MS Lajiness Drug discovery today 17 (9-10), 469-474, 2012	78	2012
Optimizing drug–target interaction prediction based on random walk on heterogeneous networks A Seal, YY Ahn, DJ Wild Journal of cheminformatics 7 (1), 1-12, 2015	67	2015
Similarity searching in databases of three-dimensional molecules and macromolecules PJ Artymiuk, PA Bath, HM Grindley, CA Pepperrell, AR Poirrette, DW Rice, ... Journal of Chemical Information and Computer Sciences 32 (6), 617-630, 1992	56	1992
edge2vec: Representation learning using edge semantics for biomedical knowledge discovery Z Gao, G Fu, C Ouyang, S Tsutsui, X Liu, J Yang, C Gessner, B Foote, ... BMC bioinformatics 20 (1), 1-15, 2019	55	2019
Web service infrastructure for chemoinformatics X Dong, KE Gilbert, R Guha, R Heiland, J Kim, ME Pierce, GC Fox, ... Journal of chemical information and modeling 47 (4), 1303-1307, 2007	55	2007
Similarity and dissimilarity methods for processing chemical structure databases VJ Gillet, DJ Wild, P Willett, J Bradshaw The Computer Journal 41 (8), 547-558, 1998	54	1998
Ensemble feature selection: consistent descriptor subsets for multiple QSAR models D Dutta, R Guha, D Wild, T Chen Journal of Chemical Information and Modeling 47 (3), 989-997, 2007	52	2007
Exploring project management methodologies used within data science teams J Saltz, N Hotz, D Wild, K Stirling	49	2018
Electronic laboratory notebooks progress and challenges in implementation HK Machina, DJ Wild Journal of laboratory automation 18 (4), 264-268, 2013	46	2013
PubChem BioAssays as a data source for predictive models B Chen, DJ Wild Journal of Molecular Graphics and Modelling 28 (5), 420-426, 2010	46	2010
Chemical data mining of the NCI human tumor cell line database H Wang, J Klinginsmith, X Dong, AC Lee, R Guha, Y Wu, GM Crippen, ... Journal of chemical information and modeling 47 (6), 2063-2076, 2007	44	2007

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