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Nevena Todorova
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Year
Nanomaterials in biological environment: a review of computer modelling studies
AJ Makarucha, N Todorova, I Yarovsky
European Biophysics Journal 40, 103-115, 2011
1482011
Surface enhanced Raman scattering artificial nose for high dimensionality fingerprinting
N Kim, MR Thomas, MS Bergholt, IJ Pence, H Seong, P Charchar, ...
Nature communications 11 (1), 207, 2020
1252020
DNA origami protection and molecular interfacing through engineered sequence-defined peptoids
ST Wang, MA Gray, S Xuan, Y Lin, J Byrnes, AI Nguyen, N Todorova, ...
Proceedings of the National Academy of Sciences 117 (12), 6339-6348, 2020
1112020
Systematic comparison of empirical forcefields for molecular dynamic simulation of insulin
N Todorova, FS Legge, H Treutlein, I Yarovsky
The Journal of Physical Chemistry B 112 (35), 11137-11146, 2008
782008
Surface presentation of functional peptides in solution determines cell internalization efficiency of TAT conjugated nanoparticles
N Todorova, C Chiappini, M Mager, B Simona, II Patel, MM Stevens, ...
Nano Letters 14 (9), 5229-5237, 2014
772014
Understanding and designing the gold–bio interface: Insights from simulations
P Charchar, AJ Christofferson, N Todorova, I Yarovsky
Small 12 (18), 2395-2418, 2016
702016
Dimensionality of carbon nanomaterials determines the binding and dynamics of amyloidogenic peptides: multiscale theoretical simulations
N Todorova, AJ Makarucha, NDM Hine, AA Mostofi, I Yarovsky
PLoS computational biology 9 (12), e1003360, 2013
652013
Surface dynamics and ligand–core interactions of quantum sized photoluminescent gold nanoclusters
Y Lin, P Charchar, AJ Christofferson, MR Thomas, N Todorova, MM Mazo, ...
Journal of the American Chemical Society 140 (51), 18217-18226, 2018
632018
Exploring the folding free energy landscape of insulin using bias exchange metadynamics
N Todorova, F Marinelli, S Piana, I Yarovsky
The journal of physical chemistry B 113 (11), 3556-3564, 2009
602009
Electromagnetic-field effects on structure and dynamics of amyloidogenic peptides
N Todorova, A Bentvelzen, NJ English, I Yarovsky
The Journal of Chemical Physics 144 (8), 2016
582016
A structural model for apolipoprotein C-II amyloid fibrils: experimental characterization and molecular dynamics simulations
CL Teoh, CLL Pham, N Todorova, A Hung, CN Lincoln, E Lees, YH Lam, ...
Journal of molecular biology 405 (5), 1246-1266, 2011
522011
H2S dissociation on the Fe (1 0 0) surface: An ab initio molecular dynamics study
MJS Spencer, N Todorova, I Yarovsky
Surface science 602 (8), 1547-1553, 2008
402008
Facet-dependent interactions of islet amyloid polypeptide with gold nanoparticles: Implications for fibril formation and peptide-induced lipid membrane disruption
ST Wang, Y Lin, N Todorova, Y Xu, M Mazo, S Rana, V Leonardo, ...
Chemistry of Materials 29 (4), 1550-1560, 2017
382017
Single-step homogeneous immunoassays utilizing epitope-tagged gold nanoparticles: on the mechanism, feasibility, and limitations
H Andresen, M Mager, M Griessner, P Charchar, N Todorova, N Bell, ...
Chemistry of Materials 26 (16), 4696-4704, 2014
362014
Identifying the coiled-coil triple helix structure of β-peptide nanofibers at atomic resolution
AJ Christofferson, ZS Al-Garawi, N Todorova, J Turner, MP Del Borgo, ...
ACS nano 12 (9), 9101-9109, 2018
352018
Effects of size and functionalization on the structure and properties of graphene oxide nanoflakes: an in silico investigation
E Peng, N Todorova, I Yarovsky
ACS omega 3 (9), 11497-11503, 2018
292018
Effects of forcefield and sampling method in all-atom simulations of inherently disordered proteins: Application to conformational preferences of human amylin
E Peng, N Todorova, I Yarovsky
PLoS One 12 (10), e0186219, 2017
262017
An active site inhibitor induces conformational penalties for ACE2 recognition by the spike protein of SARS-CoV-2
BJ Williams-Noonan, N Todorova, K Kulkarni, MI Aguilar, I Yarovsky
The Journal of Physical Chemistry B 125 (10), 2533-2550, 2021
242021
Electromagnetic field modulates aggregation propensity of amyloid peptides
N Todorova, A Bentvelzen, I Yarovsky
The Journal of Chemical Physics 152 (3), 2020
232020
Ab initio study of S dynamics on iron surfaces
N Todorova, MJS Spencer, I Yarovsky
Surface science 601 (3), 665-671, 2007
232007
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Articles 1–20