PinAPL-Py: A comprehensive web-application for the analysis of CRISPR/Cas9 screens PN Spahn, T Bath, RJ Weiss, J Kim, JD Esko, NE Lewis, O Harismendy Scientific reports 7 (1), 15854, 2017 | 85 | 2017 |
Patient perspectives about decisions to share medical data and biospecimens for research J Kim, H Kim, E Bell, T Bath, P Paul, A Pham, X Jiang, K Zheng, ... JAMA network open 2 (8), e199550-e199550, 2019 | 82 | 2019 |
Model-based assessment of mammalian cell metabolic functionalities using omics data A Richelle, BP Kellman, AT Wenzel, AWT Chiang, T Reagan, ... Cell reports methods 1 (3), 2021 | 30* | 2021 |
iDASH secure genome analysis competition 2018: blockchain genomic data access logging, homomorphic encryption on GWAS, and DNA segment searching TT Kuo, X Jiang, H Tang, XF Wang, T Bath, D Bu, L Wang, A Harmanci, ... BMC medical genomics 13, 1-12, 2020 | 28 | 2020 |
MAGI: a Node. js web service for fast microRNA-Seq analysis in a GPU infrastructure J Kim, E Levy, A Ferbrache, P Stepanowsky, C Farcas, S Wang, ... Bioinformatics 30 (19), 2826-2827, 2014 | 28 | 2014 |
Benchmarking blockchain-based gene-drug interaction data sharing methods: a case study from the iDASH 2019 secure genome analysis competition blockchain track TT Kuo, T Bath, S Ma, N Pattengale, M Yang, Y Cao, CM Hudson, J Kim, ... International journal of medical informatics 154, 104559, 2021 | 25 | 2021 |
The evolving privacy and security concerns for genomic data analysis and sharing as observed from the iDASH competition TT Kuo, X Jiang, H Tang, XF Wang, A Harmanci, M Kim, K Post, D Bu, ... Journal of the American Medical Informatics Association 29 (12), 2182-2190, 2022 | 14 | 2022 |
VERTIcal Grid lOgistic regression with Confidence Intervals (VERTIGO-CI) J Kim, W Li, T Bath, X Jiang, L Ohno-Machado AMIA Summits on Translational Science Proceedings 2021, 355, 2021 | 3 | 2021 |
PinAPL-Py: a web-service for the analysis of CRISPR-Cas9 Screens PN Spahn, T Bath, RJ Weiss, J Kim, JD Esko, NE Lewis, O Harismendy bioRxiv, 147462, 2017 | | 2017 |