| Reprogramming of the circadian clock by nutritional challenge KL Eckel-Mahan, VR Patel, S De Mateo, R Orozco-Solis, NJ Ceglia, ... Cell 155 (7), 1464-1478, 2013 | 604 | 2013 |
| Partitioning circadian transcription by SIRT6 leads to segregated control of cellular metabolism S Masri, P Rigor, M Cervantes, N Ceglia, C Sebastian, C Xiao, ... Cell 158 (3), 659-672, 2014 | 266 | 2014 |
| Atlas of circadian metabolism reveals system-wide coordination and communication between clocks KA Dyar, D Lutter, A Artati, NJ Ceglia, Y Liu, D Armenta, M Jastroch, ... Cell 174 (6), 1571-1585. e11, 2018 | 244 | 2018 |
| Probabilistic cell-type assignment of single-cell RNA-seq for tumor microenvironment profiling AW Zhang, C O’Flanagan, EA Chavez, JLP Lim, N Ceglia, A McPherson, ... Nature methods 16 (10), 1007-1015, 2019 | 212 | 2019 |
| Dissociation of solid tumor tissues with cold active protease for single-cell RNA-seq minimizes conserved collagenase-associated stress responses CH O’Flanagan, KR Campbell, AW Zhang, F Kabeer, JLP Lim, J Biele, ... Genome biology 20 (1), 1-13, 2019 | 155 | 2019 |
| Fasting imparts a switch to alternative daily pathways in liver and muscle K Kinouchi, C Magnan, N Ceglia, Y Liu, M Cervantes, N Pastore, T Huynh, ... Cell reports 25 (12), 3299-3314. e6, 2018 | 101 | 2018 |
| What time is it? Deep learning approaches for circadian rhythms F Agostinelli, N Ceglia, B Shahbaba, P Sassone-Corsi, P Baldi Bioinformatics 32 (12), i8-i17, 2016 | 80 | 2016 |
| Tim-4+ cavity-resident macrophages impair anti-tumor CD8+ T cell immunity A Chow, S Schad, MD Green, MD Hellmann, V Allaj, N Ceglia, G Zago, ... Cancer Cell 39 (7), 973-988. e9, 2021 | 72 | 2021 |
| Circadian control of fatty acid elongation by SIRT1 protein-mediated deacetylation of acetyl-coenzyme A synthetase 1 S Sahar, S Masubuchi, K Eckel-Mahan, S Vollmer, L Galla, N Ceglia, ... Journal of Biological Chemistry 289 (9), 6091-6097, 2014 | 68 | 2014 |
| Comparative circadian metabolomics reveal differential effects of nutritional challenge in the serum and liver S Abbondante, KL Eckel-Mahan, NJ Ceglia, P Baldi, P Sassone-Corsi Journal of Biological Chemistry 291 (6), 2812-2828, 2016 | 64 | 2016 |
| Clonal fitness inferred from time-series modelling of single-cell cancer genomes S Salehi, F Kabeer, N Ceglia, M Andronescu, MJ Williams, KR Campbell, ... Nature 595 (7868), 585-590, 2021 | 52 | 2021 |
| SIRT6 suppresses cancer stem-like capacity in tumors with PI3K activation independently of its deacetylase activity RM Ioris, M Galie, G Ramadori, JG Anderson, A Charollais, ... Cell reports 18 (8), 1858-1868, 2017 | 49 | 2017 |
| The circadian dynamics of the hippocampal transcriptome and proteome is altered in experimental temporal lobe epilepsy KJ Debski, N Ceglia, A Ghestem, AI Ivanov, GE Brancati, S Bröer, AM Bot, ... Science advances 6 (41), eaat5979, 2020 | 41 | 2020 |
| S-adenosyl-l-homocysteine hydrolase links methionine metabolism to the circadian clock and chromatin remodeling CM Greco, M Cervantes, JM Fustin, K Ito, N Ceglia, M Samad, J Shi, ... Science advances 6 (51), eabc5629, 2020 | 37 | 2020 |
| The pervasiveness and plasticity of circadian oscillations: the coupled circadian-oscillators framework VR Patel, N Ceglia, M Zeller, K Eckel-Mahan, P Sassone-Corsi, P Baldi Bioinformatics 31 (19), 3181-3188, 2015 | 37 | 2015 |
| CircadiOmics: circadian omic web portal N Ceglia, Y Liu, S Chen, F Agostinelli, K Eckel-Mahan, P Sassone-Corsi, ... Nucleic acids research 46 (W1), W157-W162, 2018 | 36 | 2018 |
| Mir-132/212 is required for maturation of binocular matching of orientation preference and depth perception R Mazziotti, L Baroncelli, N Ceglia, G Chelini, GD Sala, C Magnan, ... Nature communications 8 (1), 15488, 2017 | 34 | 2017 |
| Distinct metabolic adaptation of liver circadian pathways to acute and chronic patterns of alcohol intake J Gaucher, K Kinouchi, N Ceglia, E Montellier, S Peleg, CM Greco, ... Proceedings of the National Academy of Sciences 116 (50), 25250-25259, 2019 | 33 | 2019 |
| Genome architecture mediates transcriptional control of human myogenic reprogramming S Liu, H Chen, S Ronquist, L Seaman, N Ceglia, W Meixner, PY Chen, ... Iscience 6, 232-246, 2018 | 19 | 2018 |
| Ovarian cancer mutational processes drive site-specific immune evasion I Vázquez-García, F Uhlitz, N Ceglia, JLP Lim, M Wu, N Mohibullah, ... Nature, 1-9, 2022 | 18 | 2022 |
