Malabika Sarker
Malabika Sarker
President - Sarker Research And Education LLC
Verified email at - Homepage
Cited by
Cited by
Human protein reference database—2006 update
GR Mishra, M Suresh, K Kumaran, N Kannabiran, S Suresh, P Bala, ...
Nucleic acids research 34 (suppl_1), D411-D414, 2006
EcoCyc: a comprehensive database of Escherichia coli biology
IM Keseler, J Collado-Vides, A Santos-Zavaleta, M Peralta-Gil, ...
Nucleic acids research 39 (suppl_1), D583-D590, 2010
Analysis of the human protein interactome and comparison with yeast, worm and fly interaction datasets
TKB Gandhi, J Zhong, S Mathivanan, L Karthick, KN Chandrika, ...
Nature genetics 38 (3), 285-293, 2006
SPOTS: signaling protein oligomeric transduction structures are early mediators of death receptor–induced apoptosis at the plasma membrane
RM Siegel, JR Muppidi, M Sarker, A Lobito, M Jen, D Martin, SE Straus, ...
The Journal of cell biology 167 (4), 735-744, 2004
Plasma Proteome Database as a resource for proteomics research
B Muthusamy, G Hanumanthu, S Suresh, B Rekha, D Srinivas, L Karthick, ...
Proteomics 5 (13), 3531-3536, 2005
PARP-1 modifies the effectiveness of p53-mediated DNA damage response.
OFJ Valenzuela MT, Guerrero R, Núñez MI, Ruiz De Almodóvar JM, Sarker M, de ...
Oncogene 21 (7), 1108-16, 2002
Computational databases, pathway and cheminformatics tools for tuberculosis drug discovery
S Ekins, JS Freundlich, I Choi, M Sarker, C Talcott
Trends in microbiology 19 (2), 65-74, 2011
Machine Learning Models and Pathway Genome Data Base for Trypanosoma cruzi Drug Discovery
S Ekins, J Lage de Siqueira-Neto, LI McCall, M Sarker, M Yadav, ...
PLoS neglected tropical diseases 9 (6), e0003878, 2015
Activation of protein kinase C inhibits TRAIL-induced caspases activation, mitochondrial events and apoptosis in a human leukemic T cell line
M Sarker, C Ruiz-Ruiz, A Lopez-Rivas
Cell Death & Differentiation 8 (2), 172-181, 2001
Stimulation of the mitogen-activated protein kinase pathway antagonizes TRAIL-induced apoptosis downstream of BID cleavage in human breast cancer MCF-7 cells
M Sarker, C Ruiz-Ruiz, G Robledo, A Lopez-Rivas
Oncogene 21 (27), 4323-4327, 2002
New target prediction and visualization tools incorporating open source molecular fingerprints for TB Mobile 2.0
AM Clark, M Sarker, S Ekins
Journal of cheminformatics 6, 1-17, 2014
TB Mobile: a mobile app for anti-tuberculosis molecules with known targets
S Ekins, AM Clark, M Sarker
Journal of cheminformatics 5, 1-14, 2013
Combining Cheminformatics Methods and Pathway Analysis to Identify Molecules with Whole-Cell Activity Against Mycobacterium Tuberculosis
M Sarker, C Talcott, P Madrid, S Chopra, BA Bunin, G Lamichhane, ...
Pharmaceutical research 29, 2115-2127, 2012
Computational models for neglected diseases: gaps and opportunities
EL Ponder, JS Freundlich, M Sarker, S Ekins
Pharmaceutical research 31, 271-277, 2014
Combining Metabolite-Based Pharmacophores with Bayesian Machine Learning Models for Mycobacterium tuberculosis Drug Discovery
S Ekins, PB Madrid, M Sarker, SG Li, N Mittal, P Kumar, X Wang, ...
PloS one 10 (10), e0141076, 2015
Analysis of the human protein interactome and comparison with yeast, worm and y interaction datasets
SS Mohan, S Sharma, S Pinkert, S Nagaraju, B Periaswamy, G Mishra, ...
Nat Genet 38, 285293Ghazalpour, 2006
In silico systems biology approaches for the identification of antimicrobial targets
M Sarker, C Talcott, AK Galande
In Silico Models for Drug Discovery, 13-30, 2013
In silico pathway analysis predicts metabolites that are potential antimicrobial targets
M Sarker, S Chopra, K Mortelmans, K Kodukula, C Talcott, AK Galande
J Comput Sci Syst Biol 4 (2), 21-26, 2011
EcoCyc: a comprehensive database of Escherichia coli biology. Nucleic Acids Res39: D583–D590
IM Keseler, J Collado-Vides, A Santos-Zavaleta, M Peralta-Gil, ...
Plasma proteome database
M Sarker, G Hanumanthu, A Pandey
Proteomics of Human Body Fluids: Principles, Methods, and Applications, 129-136, 2007
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