Martijn Huynen

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Berend SnelUtrecht UniversityVerified email at uu.nl
Peer BorkDirector of EMBL HeidelbergVerified email at embl.de
Bas E. DutilhMicroverse Cluster, Friedrich Schiller University Jena | Bioinformatics, Utrecht UniversityVerified email at uni-jena.de
Thomas DandekarProfessor, Julius Maximilian University of Würzburg, GermanyVerified email at uni-wuerzburg.de
Prof. dr. Jan A.M. SmeitinkProfessor in Mitochondrial MedicineVerified email at radboudumc.nl
Richard RodenburgClinical Laboratory GeneticistVerified email at radboudumc.nl
Toni GabaldonGroup Leader, Institute for Research in Biomedicine (IRB), Barcelona Supercomputing Centre (BSC)Verified email at crg.es
Willem JG MelchersVerified email at radboudumc.nl
Vera van Noortprofessor, KULeuvenVerified email at biw.kuleuven.be
Christian von MeringProfessor of Computational Biology, University of Zurich and Swiss Institute of BioinformaticsVerified email at imls.uzh.ch
Robin van der LeeAbCellera BiologicsVerified email at cmmt.ubc.ca
Peter F StadlerProfessor of Bioinformatics, Univ. LeipzigVerified email at bioinf.uni-leipzig.de
Isabel DuarteUniversity of AlgarveVerified email at ualg.pt
Thijs J. G. EttemaLaboratory of Microbiology, Wageningen University, The NetherlandsVerified email at wur.nl
a.g.m.tielensUtrecht University, Fac. Vet. Medicine and Erasmus MC, University Medical Center RotterdamVerified email at uu.nl
Joris VeltmanInstitute of Genetics & Cancer, University of Edinburgh, United KingdomVerified email at ed.ac.uk
Neil McEwanScotland's Rural CollegeVerified email at sruc.ac.uk
Annette SchenckProf. Translational Genomics of Neurodevelopmental DisordersVerified email at radboudumc.nl
John van der OostMicrobiology, Wageningen UniversityVerified email at wur.nl
Christian GilissenRadboud university medical centerVerified email at radboudumc.nl

Martijn Huynen

Other namesMartijn A Huijnen

MBS, Radboud University Medical Centre

Verified email at radboudumc.nl

bioinformatics cilia mitochondria molecular evolution


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STRING: a database of predicted functional associations between proteins C Mering, M Huynen, D Jaeggi, S Schmidt, P Bork, B Snel Nucleic acids research 31 (1), 258-261, 2003	2697	2003
STRING: known and predicted protein–protein associations, integrated and transferred across organisms C Von Mering, LJ Jensen, B Snel, SD Hooper, M Krupp, M Foglierini, ... Nucleic acids research 33 (suppl_1), D433-D437, 2005	2024	2005
Deciphering the evolution and metabolism of an anammox bacterium from a community genome M Strous, E Pelletier, S Mangenot, T Rattei, A Lehner, MW Taylor, M Horn, ... Nature 440 (7085), 790-794, 2006	1456	2006
STRING: a web-server to retrieve and display the repeatedly occurring neighbourhood of a gene B Snel, G Lehmann, P Bork, MA Huynen Nucleic acids research 28 (18), 3442-3444, 2000	1379	2000
Conservation of gene order: a fingerprint of proteins that physically interact T Dandekar, B Snel, M Huynen, P Bork Trends in biochemical sciences 23 (9), 324-328, 1998	1375	1998
Genome phylogeny based on gene content B Snel, P Bork, MA Huynen Nature genetics 21 (1), 108-110, 1999	835	1999
Smoothness within ruggedness: the role of neutrality in adaptation. MA Huynen, PF Stadler, W Fontana Proceedings of the National Academy of Sciences 93 (1), 397-401, 1996	724	1996
Neutral evolution of mutational robustness E Van Nimwegen, JP Crutchfield, M Huynen Proceedings of the National Academy of Sciences 96 (17), 9716-9720, 1999	710	1999
Predicting disease genes using protein–protein interactions M Oti, B Snel, MA Huynen, HG Brunner Journal of medical genetics 43 (8), 691-698, 2006	661	2006
Predicting protein function by genomic context: quantitative evaluation and qualitative inferences M Huynen, B Snel, W Lathe, P Bork Genome research 10 (8), 1204-1210, 2000	623	2000
Measuring genome evolution MA Huynen, P Bork Proceedings of the National Academy of Sciences 95 (11), 5849-5856, 1998	609	1998
Predicting function: from genes to genomes and back P Bork, T Dandekar, Y Diaz-Lazcoz, F Eisenhaber, M Huynen, Y Yuan Journal of molecular biology 283 (4), 707-725, 1998	566	1998
Whole-genome sequencing of bacterial pathogens: the future of nosocomial outbreak analysis S Quainoo, JPM Coolen, SAFT van Hijum, MA Huynen, WJG Melchers, ... Clinical microbiology reviews 30 (4), 1015-1063, 2017	485	2017
POMT2 mutations cause α-dystroglycan hypoglycosylation and Walker-Warburg syndrome J van Reeuwijk, M Janssen, C van den Elzen, DBV De Bernabé, ... Journal of medical genetics 42 (12), 907-912, 2005	476	2005
Genomes in flux: the evolution of archaeal and proteobacterial gene content B Snel, P Bork, MA Huynen Genome research 12 (1), 17-25, 2002	449	2002
Pathway alignment: application to the comparative analysis of glycolytic enzymes T Dandekar, S Schuster, B Snel, M Huynen, P Bork Biochemical Journal 343 (1), 115-124, 1999	364	1999
Systematic phenomics analysis deconvolutes genes mutated in intellectual disability into biologically coherent modules K Kochinke, C Zweier, B Nijhof, M Fenckova, P Cizek, F Honti, ... The American Journal of Human Genetics 98 (1), 149-164, 2016	352	2016
The identification of functional modules from the genomic association of genes B Snel, P Bork, MA Huynen Proceedings of the National Academy of Sciences 99 (9), 5890-5895, 2002	328	2002
The yeast coexpression network has a small‐world, scale‐free architecture and can be explained by a simple model V Van Noort, B Snel, MA Huynen EMBO reports 5 (3), 280-284, 2004	320	2004
Re-annotating the Mycoplasma pneumoniae genome sequence: adding value, function and reading frames T Dandekar, M Huynen, JT Regula, B Ueberle, CU Zimmermann, ... Nucleic acids research 28 (17), 3278-3288, 2000	314	2000

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