Joseph M Dale
Joseph M Dale
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Empirical analysis of transcriptional activity in the Arabidopsis genome
K Yamada, J Lim, JM Dale, H Chen, P Shinn, CJ Palm, AM Southwick, ...
Science 302 (5646), 842-846, 2003
Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology
PD Karp, SM Paley, M Krummenacker, M Latendresse, JM Dale, TJ Lee, ...
Briefings in bioinformatics 11 (1), 40-79, 2010
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases
R Caspi, T Altman, JM Dale, K Dreher, CA Fulcher, F Gilham, P Kaipa, ...
Nucleic acids research 38 (suppl_1), D473-D479, 2010
Machine learning methods for metabolic pathway prediction
JM Dale, L Popescu, PD Karp
BMC bioinformatics 11 (1), 1-14, 2010
Identification of inhibitors of auxin transcriptional activation by means of chemical genetics in Arabidopsis
JI Armstrong, S Yuan, JM Dale, VN Tanner, A Theologis
Proceedings of the National Academy of Sciences 101 (41), 14978-14983, 2004
A systematic study of genome context methods: calibration, normalization and combination
L Ferrer, JM Dale, PD Karp
BMC bioinformatics 11, 1-24, 2010
Subfamily hmms in functional genomics
D Brown, N Krishnamurthy, JM Dale, W Christopher, K Sjölander
Biocomputing 2005, 322-333, 2005
The Pathway Tools Software in 2009
PD Karp, SM Paley, M Krummenacker, M Latendresse, JM Dale, T Lee, ...
S225–S232 p, 0
Multiple-species Network-based Protein Classification
JM Dale
University of California, Berkeley with the University of California, San …, 2008
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