Dwight Kuo

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Trey IdekerUniversity of California San DiegoVerified email at ucsd.edu
Wolfgang BanzhafKoza Chair in Genetic Programming, Michigan State University, USAVerified email at msu.edu
Sourav BandyopadhyayUniversity of California, San FranciscoVerified email at cc.ucsf.edu
Eric JaehnigBaylor College of MedicineVerified email at bcm.edu
André LeierUniversity of Alabama at BirminghamVerified email at uabmc.edu
Monika MehtaIntegrated Research Facility (NIAID/NIH)Verified email at nih.gov
Janusz DutkowskiData4Cure, Inc.Verified email at data4cure.com
Nevan KroganUniversity of California-San FranciscoVerified email at ucsf.edu
Bernd BodenmillerDual Professor University of Zurich and ETH Zurich. Director, Department of Quantitative BiomedicineVerified email at uzh.ch
Mattia PelizzolaAssociate Professor at the Milano-Bicocca UniversityVerified email at unimib.it
Joseph R. EckerHoward Hughes Medical Institute and The Salk Institute for Biological StudiesVerified email at Salk.edu
Timothy R. HughesUniversity of TorontoVerified email at utoronto.ca
Joseph NerySalk Institue for Biological StudiesVerified email at salk.edu
Bing Ren, Ph.D.University of California, San DiegoVerified email at ucsd.edu
Gary HonUT Southwestern Medical CenterVerified email at utsouthwestern.edu
Timothy RavasiMarine Climate Change Unit, Okinawa Institute of Science and Technology Graduate University (OIST)Verified email at oist.jp
Chris EliasmithProfessor, University of WaterlooVerified email at uwaterloo.ca
Gene Yeo PhD MBAProfessor of Cellular and Molecular Medicine at UC San DiegoVerified email at ucsd.edu
Paul D. AdamsLawrence Berkeley Laboratory & University of California BerkeleyVerified email at lbl.gov
Jeffrey DietrichCTO Lygos, IncVerified email at lygos.com

Dwight Kuo

Alamar Biosciences

Verified email at alamarbio.com - Homepage


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Rewiring of genetic networks in response to DNA damage S Bandyopadhyay, M Mehta, D Kuo, MK Sung, R Chuang, EJ Jaehnig, ... Science 330 (6009), 1385-1389, 2010	545	2010
Temporal transcriptional response to ethylene gas drives growth hormone cross-regulation in Arabidopsis KN Chang, S Zhong, MT Weirauch, G Hon, M Pelizzola, H Li, SC Huang, ... elife 2, e00675, 2013	420	2013
Hierarchical modularity and the evolution of genetic interactomes across species CJ Ryan, A Roguev, K Patrick, J Xu, H Jahari, Z Tong, P Beltrao, M Shales, ... Molecular cell 46 (5), 691-704, 2012	232	2012
Network topology and the evolution of dynamics in an artificial genetic regulatory network model created by whole genome duplication and divergence PD Kuo, W Banzhaf, A Leier Biosystems 85 (3), 177-200, 2006	133	2006
DNA replication stress differentially regulates G1/S genes via Rad53‐dependent inactivation of Nrm1 A Travesa, D Kuo, RAM De Bruin, TI Kalashnikova, M Guaderrama, ... The EMBO journal 31 (7), 1811-1822, 2012	100	2012
Coevolution within a transcriptional network by compensatory trans and cis mutations D Kuo, K Licon, S Bandyopadhyay, R Chuang, C Luo, J Catalana, ... Genome research 20 (12), 1672-1678, 2010	86	2010
Checkpoint kinases regulate a global network of transcription factors in response to DNA damage EJ Jaehnig, D Kuo, H Hombauer, TG Ideker, RD Kolodner Cell reports 4 (1), 174-188, 2013	83	2013
Manipulation of the carbon storage regulator system for metabolite remodeling and biofuel production in Escherichia coli AE McKee, BJ Rutherford, DC Chivian, EK Baidoo, D Juminaga, D Kuo, ... Microbial cell factories 11, 1-12, 2012	67	2012
Evolving dynamics in an artificial regulatory network model PD Kuo, A Leier, W Banzhaf Parallel Problem Solving from Nature-PPSN VIII: 8th International Conference …, 2004	47	2004
Integrating behavioral and neural data in a model of zebrafish network interaction PD Kuo, C Eliasmith Biological Cybernetics 93, 178-187, 2005	42	2005
Chaos and its computing paradigm D Kuo IEEE Potentials 24 (2), 13-15, 2005	41	2005
Retrotransposon long interspersed nucleotide element‐1 (LINE‐1) is activated during salamander limb regeneration W Zhu, D Kuo, J Nathanson, A Satoh, GM Pao, GW Yeo, SV Bryant, ... Development, growth & differentiation 54 (7), 673-685, 2012	40	2012
Evolutionary divergence in the fungal response to fluconazole revealed by soft clustering D Kuo, K Tan, G Zinman, T Ravasi, Z Bar-Joseph, T Ideker Genome biology 11, 1-12, 2010	40	2010
Network motifs in natural and artificial transcriptional regulatory networks W Banzhaf, PD Kuo Journal of Biological Physics and Chemistry 4, 85-92, 2004	35	2004
Evolving noisy oscillatory dynamics in genetic regulatory networks A Leier, PD Kuo, W Banzhaf, K Burrage Genetic Programming: 9th European Conference, EuroGP 2006, Budapest, Hungary …, 2006	31	2006
Small world and scale-free network topologies in an artificial regulatory network model PD Kuo, W Banzhaf	21	2004
NULISA: a proteomic liquid biopsy platform with attomolar sensitivity and high multiplexing W Feng, JC Beer, Q Hao, IS Ariyapala, A Sahajan, A Komarov, K Cha, ... Nature Communications 14 (1), 7238, 2023	19	2023
Genetic algorithm optimization of escape and normal swimming gaits for a hydrodynamical model of carangiform locomotion PD Kuo, D Grierson Proceedings of the Genetic and Evolutionary Computation Conference (GECCO …, 2003	13	2003
Analysis of preferential network motif generation in an artificial regulatory network model created by duplication and divergence A Leier, PD Kuo, W Banzhaf Advances in Complex Systems 10 (02), 155-172, 2007	12	2007
Checkpoint kinases regulate a global network of transcription factors in response to DNA damage. Cell Rep. 4: 174–188 EJ Jaehnig, D Kuo, H Hombauer, TG Ideker, RD Kolodner	8	2013

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