| Integrative analysis of 111 reference human epigenomes A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, A Heravi-Moussavi, ... Nature 518 (7539), 317-330, 2015 | 6240 | 2015 |
| Genetic effects on gene expression across human tissues GTEx Consortium Lead analysts: Aguet François 1 Brown Andrew A. 2 3 4 Castel ... Nature 550 (7675), 204-213, 2017 | 3504 | 2017 |
| Conserved cell types with divergent features in human versus mouse cortex RD Hodge, TE Bakken, JA Miller, KA Smith, ER Barkan, LT Graybuck, ... Nature 573 (7772), 61-68, 2019 | 1513 | 2019 |
| FTO Obesity Variant Circuitry and Adipocyte Browning in Humans M Claussnitzer, SN Dankel, KH Kim, G Quon, W Meuleman, C Haugen, ... New England Journal of Medicine 373 (10), 895-907, 2015 | 1463 | 2015 |
| Conserved epigenomic signals in mice and humans reveal immune basis of Alzheimer’s disease E Gjoneska, AR Pfenning, H Mathys, G Quon, A Kundaje, LH Tsai, ... Nature 518 (7539), 365-369, 2015 | 597 | 2015 |
| Conservation of core gene expression in vertebrate tissues ET Chan, GT Quon, G Chua, T Babak, M Trochesset, RA Zirngibl, J Aubin, ... Journal of biology 8, 1-17, 2009 | 397 | 2009 |
| Tissue-specific regulatory circuits reveal variable modular perturbations across complex diseases D Marbach, D Lamparter, G Quon, M Kellis, Z Kutalik, S Bergmann Nature methods 13 (4), 366-370, 2016 | 355 | 2016 |
| Predicting in vivo binding sites of RNA-binding proteins using mRNA secondary structure X Li, G Quon, HD Lipshitz, Q Morris Rna 16 (6), 1096-1107, 2010 | 201 | 2010 |
| PERT: a method for expression deconvolution of human blood samples from varied microenvironmental and developmental conditions W Qiao, G Quon, E Csaszar, M Yu, Q Morris, PW Zandstra PLoS computational biology 8 (12), e1002838, 2012 | 150 | 2012 |
| Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research C Kern, Y Wang, X Xu, Z Pan, M Halstead, G Chanthavixay, P Saelao, ... Nature communications 12 (1), 1821, 2021 | 132 | 2021 |
| Pegasys: software for executing and integrating analyses of biological sequences SP Shah, DYM He, JN Sawkins, JC Druce, G Quon, D Lett, GXY Zheng, ... BMC bioinformatics 5, 1-16, 2004 | 108 | 2004 |
| Computational purification of individual tumor gene expression profiles leads to significant improvements in prognostic prediction G Quon, S Haider, AG Deshwar, A Cui, PC Boutros, Q Morris Genome medicine 5, 1-20, 2013 | 107 | 2013 |
| scAlign: a tool for alignment, integration, and rare cell identification from scRNA-seq data N Johansen, G Quon Genome biology 20 (1), 166, 2019 | 102 | 2019 |
| Spectral alignment of graphs S Feizi, G Quon, M Recamonde-Mendoza, M Medard, M Kellis, ... IEEE Transactions on Network Science and Engineering 7 (3), 1182-1197, 2019 | 95* | 2019 |
| The benefits of selecting phenotype-specific variants for applications of mixed models in genomics C Lippert, G Quon, EY Kang, CM Kadie, J Listgarten, D Heckerman Scientific reports 3 (1), 1815, 2013 | 70 | 2013 |
| Patterns of methylation heritability in a genome-wide analysis of four brain regions G Quon, C Lippert, D Heckerman, J Listgarten Nucleic acids research 41 (4), 2095-2104, 2013 | 61 | 2013 |
| ISOLATE: a computational strategy for identifying the primary origin of cancers using high-throughput sequencing G Quon, Q Morris Bioinformatics 25 (21), 2882-2889, 2009 | 59 | 2009 |
| Systems-level properties of EGFR-RAS-ERK signaling amplify local signals to generate dynamic gene expression heterogeneity AE Davies, M Pargett, S Siebert, TE Gillies, Y Choi, SJ Tobin, AR Ram, ... Cell systems 11 (2), 161-175. e5, 2020 | 41 | 2020 |
| Probabilistic modeling of imaging, genetics and diagnosis NK Batmanghelich, A Dalca, G Quon, M Sabuncu, P Golland IEEE transactions on medical imaging 35 (7), 1765-1779, 2016 | 40 | 2016 |
| ISOpureR: an R implementation of a computational purification algorithm of mixed tumour profiles CV Anghel, G Quon, S Haider, F Nguyen, AG Deshwar, QD Morris, ... BMC bioinformatics 16, 1-11, 2015 | 38 | 2015 |
