| IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies LT Nguyen, HA Schmidt, A von Haeseler, BQ Minh Molecular Biology and Evolution 32 (1), 268-274, 2015 | 20736 | 2015 |
| IQ-TREE 2: New models and efficient methods for phylogenetic inference in the genomic era BQ Minh, HA Schmidt, O Chernomor, D Schrempf, MD Woodhams, ... Molecular Biology and Evolution 37 (5), 1530-1534, 2020 | 8912 | 2020 |
| TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing HA Schmidt, K Strimmer, M Vingron, A von Haeseler Bioinformatics 18 (3), 502-504, 2002 | 2909 | 2002 |
| Unexpected complexity of the Wnt gene family in a sea anemone A Kusserow, K Pang, C Sturm, M Hrouda, J Lentfer, HA Schmidt, ... Nature 433 (7022), 156-160, 2005 | 710 | 2005 |
| Multiple Wnts are involved in Hydra organizer formation and regeneration T Lengfeld, H Watanabe, O Simakov, D Lindgens, L Gee, L Law, ... Developmental biology 330 (1), 186-199, 2009 | 332 | 2009 |
| Expression of secreted Wnt pathway components reveals unexpected complexity of the planarian amputation response KA Gurley, SA Elliott, O Simakov, HA Schmidt, TW Holstein, AS Alvarado Developmental biology 347 (1), 24-39, 2010 | 237 | 2010 |
| An ancient Wnt-Dickkopf antagonism in hydra C Guder, S Pinho, TG Nacak, HA Schmidt, B Hobmayer, C Niehrs, ... Development 133 (5), 901-911, 2006 | 193 | 2006 |
| First DNA sequences from Asian cave bear fossils reveal deep divergences and complex phylogeographic patterns M Knapp, N Rohland, J Weinstock, G Baryshnikov, A Sher, D Nagel, ... Molecular Ecology 18 (6), 1225-1238, 2009 | 130 | 2009 |
| Corrigendum to: IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era BQ Minh, HA Schmidt, O Chernomor, D Schrempf, MD Woodhams, ... Molecular Biology and Evolution 37 (8), 2461, 2020 | 129 | 2020 |
| Nodal signalling determines biradial asymmetry in Hydra H Watanabe, HA Schmidt, A Kuhn, SK Höger, Y Kocagöz, ... Nature 515 (7525), 112-115, 2014 | 119 | 2014 |
| Genetic interaction between distinct Dobrava hantavirus subtypes in Apodemus agrarius and A. flavicollis in nature B Klempa, HA Schmidt, R Ulrich, S Kaluz, M Labuda, H Meisel, B Hjelle, ... Journal of virology 77 (1), 804-809, 2003 | 117 | 2003 |
| Want to track pandemic variants faster? Fix the bioinformatics bottleneck EB Hodcroft, N De Maio, R Lanfear, DR MacCannell, BQ Minh, ... Nature 591 (7848), 30-33, 2021 | 111 | 2021 |
| pIQPNNI: parallel reconstruction of large maximum likelihood phylogenies BQ Minh, LS Vinh, A von Haeseler, HA Schmidt Bioinformatics 21 (19), 3794-3796, 2005 | 105 | 2005 |
| Maximum‐Likelihood Analysis Using TREE‐PUZZLE HA Schmidt, A von Haeseler Current Protocols in Bioinformatics 17 (1), 6.6.1-6.6.23, 2007 | 99 | 2007 |
| Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable C Mavian, SK Pond, S Marini, BR Magalis, AM Vandamme, S Dellicour, ... Proceedings of the National Academy of Sciences 117 (23), 12522-12523, 2020 | 83 | 2020 |
| Accuracy of phylogeny reconstruction methods combining overlapping gene data sets. A Kupczok, HA Schmidt, A von Haeseler Algorithms for Molecular Biology 5 (1), 1-17, 2010 | 75 | 2010 |
| Rooted triple consensus and anomalous gene trees GB Ewing, I Ebersberger, HA Schmidt, A von Haeseler BMC evolutionary biology 8 (1), 118, 2008 | 70 | 2008 |
| Phylogenetic trees from large datasets HA Schmidt PhD Thesis, 2003 | 67 | 2003 |
| Phylogenetic inference using maximum likelihood methods HA Schmidt, A von Haeseler The phylogenetic handbook: A practical approach to phylogenetic analysis and …, 2009 | 66 | 2009 |
| IQ-TREE version 2.1. 2: Tutorials and Manual Phylogenomic software by maximum likelihood BQ Minh, R Lanfear, J Trifinopoulos, D Schrempf, HA Schmidt | 60 | 2021 |
Bui Quang Minh (Minh Bùi)Associate Professor, Australian National UniversityVerified email at anu.edu.au
