Thomas Erol Tavolara
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Identifying tumor in pancreatic neuroendocrine neoplasms from Ki67 images using transfer learning
MKK Niazi, TE Tavolara, V Arole, DJ Hartman, L Pantanowitz, MN Gurcan
PloS one 13 (4), e0195621, 2018
Attention2majority: Weak multiple instance learning for regenerative kidney grading on whole slide images
Z Su, TE Tavolara, G Carreno-Galeano, SJ Lee, MN Gurcan, MKK Niazi
Medical Image Analysis 79, 102462, 2022
A modular cGAN classification framework: Application to colorectal tumor detection
TE Tavolara, MKK Niazi, V Arole, W Chen, W Frankel, MN Gurcan
Scientific reports 9 (1), 18969, 2019
Deep learning predicts gene expression as an intermediate data modality to identify susceptibility patterns in Mycobacterium tuberculosis infected Diversity Outbred mice
TE Tavolara, MKK Niazi, AC Gower, M Ginese, G Beamer, MN Gurcan
EBioMedicine 67, 2021
Identification of difficult to intubate patients from frontal face images using an ensemble of deep learning models
TE Tavolara, MN Gurcan, S Segal, MKK Niazi
Computers in biology and medicine 136, 104737, 2021
Automatic discovery of clinically interpretable imaging biomarkers for Mycobacterium tuberculosis supersusceptibility using deep learning
TE Tavolara, MKK Niazi, M Ginese, C Piedra-Mora, DM Gatti, G Beamer, ...
EBioMedicine 62, 2020
CXCL1: A new diagnostic biomarker for human tuberculosis discovered using Diversity Outbred mice
D Koyuncu, MKK Niazi, T Tavolara, C Abeijon, ML Ginese, Y Liao, C Mark, ...
PLoS pathogens 17 (8), e1009773, 2021
Contrastive multiple instance learning: an unsupervised framework for learning slide-level representations of whole slide histopathology images without labels
TE Tavolara, MN Gurcan, MKK Niazi
Cancers 14 (23), 5778, 2022
Semantic segmentation to identify bladder layers from H&E Images
MKK Niazi, E Yazgan, TE Tavolara, W Li, CT Lee, A Parwani, MN Gurcan
Diagnostic Pathology 15, 1-8, 2020
Automated image analysis methodologies to compute bioink printability
M Uzun-Per, GJ Gillispie, TE Tavolara, JJ Yoo, A Atala, MN Gurcan, ...
Advanced Engineering Materials 23 (4), 2000900, 2021
MP58-06 automated staging of t1 bladder cancer using digital pathologic h&e images: a deep learning approach
MKK Niazi, T Tavolara, V Arole, A Parwani, C Lee, M Gurcan
The Journal of urology 199 (4S), e775-e775, 2018
One label is all you need: Interpretable AI-enhanced histopathology for oncology
TE Tavolara, Z Su, MN Gurcan, MKK Niazi
Seminars in Cancer Biology, 2023
Automated T1 bladder risk stratification based on depth of lamina propria invasion from H and E tissue biopsies: a deep learning approach
MKK Niazi, TE Tavolara, V Arole, AV Parwani, C Lee, MN Gurcan
Medical Imaging 2018: Digital Pathology 10581, 134-142, 2018
BCR-Net: A deep learning framework to predict breast cancer recurrence from histopathology images
Z Su, MKK Niazi, TE Tavolara, S Niu, GH Tozbikian, R Wesolowski, ...
PLoS One 18 (4), e0283562, 2023
Segmentation of mycobacterium tuberculosis bacilli clusters from acid-fast stained lung biopsies: a deep learning approach
TE Tavolara, MKK Niazi, G Beamer, MN Gurcan
Medical Imaging 2020: Digital Pathology 11320, 92-98, 2020
Generalization of tumor identification algorithms
MKK Niazi, TE Tavolara, C Senaras, G Tozbikian, DJ Hartman, V Arole, ...
Medical Imaging 2019: Digital Pathology 10956, 208-215, 2019
Colorectal tumor identification by transferring knowledge from pan-cytokeratin to H&E
TE Tavolara, MKK Niazi, W Chen, W Frankel, MN Gurcan
Medical Imaging 2019: Digital Pathology 10956, 229-237, 2019
Automatic generation of the ground truth for tumor budding using H&E stained slides
TE Tavolara, A Dutta, MV Burks, W Chen, W Frankel, MN Gurcan, ...
Medical Imaging 2022: Digital and Computational Pathology 12039, 40-46, 2022
Minimizing the intra-pathologist disagreement for tumor bud detection on H and E images using weakly supervised learning
TE Tavolara, W Chen, WL Frankel, MN Gurcan, MKK Niazi
Medical Imaging 2023: Digital and Computational Pathology 12471, 277-283, 2023
Predicting HER2 scores from registered HER2 and H&E images
TE Tavolara, MKK Niazi, G Tozbikian, R Wesolowski, MN Gurcan
Medical Imaging 2022: Digital and Computational Pathology 12039, 60-68, 2022
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