OpenMS: a flexible open-source software platform for mass spectrometry data analysis HL Röst, T Sachsenberg, S Aiche, C Bielow, H Weisser, F Aicheler, ... Nature methods 13 (9), 741-748, 2016 | 619 | 2016 |
Tools for label-free peptide quantification S Nahnsen, C Bielow, K Reinert, O Kohlbacher Molecular & Cellular Proteomics 12 (3), 549-556, 2013 | 302 | 2013 |
Extensive identification and analysis of conserved small ORFs in animals SD Mackowiak, H Zauber, C Bielow, D Thiel, K Kutz, L Calviello, ... Genome biology 16, 1-21, 2015 | 222 | 2015 |
Application of integrated transcriptomic, proteomic and metabolomic profiling for the delineation of mechanisms of drug induced cell stress A Wilmes, A Limonciel, L Aschauer, K Moenks, C Bielow, MO Leonard, ... Journal of proteomics 79, 180-194, 2013 | 191 | 2013 |
Proteomics quality control: quality control software for MaxQuant results C Bielow, G Mastrobuoni, S Kempa Journal of proteome research 15 (3), 777-787, 2016 | 164 | 2016 |
Mechanism of cisplatin proximal tubule toxicity revealed by integrating transcriptomics, proteomics, metabolomics and biokinetics A Wilmes, C Bielow, C Ranninger, P Bellwon, L Aschauer, A Limonciel, ... Toxicology in Vitro 30 (1), 117-127, 2015 | 136 | 2015 |
Integrative functional genomics decodes herpes simplex virus 1 AW Whisnant, CS Jürges, T Hennig, E Wyler, B Prusty, AJ Rutkowski, ... Nature communications 11 (1), 2038, 2020 | 82 | 2020 |
Evaluation of drug-induced neurotoxicity based on metabolomics, proteomics and electrical activity measurements in complementary CNS in vitro models L Schultz, MG Zurich, M Culot, A da Costa, C Landry, P Bellwon, T Kristl, ... Toxicology in Vitro 30 (1), 138-165, 2015 | 78 | 2015 |
TOPPAS: a graphical workflow editor for the analysis of high-throughput proteomics data J Junker, C Bielow, A Bertsch, M Sturm, K Reinert, O Kohlbacher Journal of proteome research 11 (7), 3914-3920, 2012 | 64 | 2012 |
MSSimulator: Simulation of mass spectrometry data C Bielow, S Aiche, S Andreotti, K Reinert Journal of proteome research 10 (7), 2922-2929, 2011 | 57 | 2011 |
On mass ambiguities in high-resolution shotgun lipidomics C Bielow, G Mastrobuoni, M Orioli, S Kempa Analytical chemistry 89 (5), 2986-2994, 2017 | 40 | 2017 |
Rapid and comprehensive impurity profiling of synthetic thyroxine by ultrahigh-performance liquid chromatography–high-resolution mass spectrometry V Neu, C Bielow, I Gostomski, R Wintringer, R Braun, K Reinert, ... Analytical chemistry 85 (6), 3309-3317, 2013 | 20 | 2013 |
Kinetic modelling of quantitative proteome data predicts metabolic reprogramming of liver cancer N Berndt, A Egners, G Mastrobuoni, O Vvedenskaya, A Fragoulis, ... British Journal of Cancer 122 (2), 233-244, 2020 | 19 | 2020 |
Investigation of reaction mechanisms of drug degradation in the solid state: a kinetic study implementing ultrahigh-performance liquid chromatography and high-resolution mass … V Neu, C Bielow, P Schneider, K Reinert, H Stuppner, CG Huber Analytical chemistry 85 (4), 2385-2390, 2013 | 13 | 2013 |
Ultrahigh-performance liquid chromatography-ultraviolet absorbance detection-high-resolution-mass spectrometry combined with automated data processing for studying the kinetics … V Neu, C Bielow, K Reinert, CG Huber Journal of chromatography A 1371, 196-203, 2014 | 12 | 2014 |
Optimal decharging and clustering of charge ladders generated in ESI− MS C Bielow, S Ruzek, CG Huber, K Reinert Journal of Proteome Research 9 (5), 2688-2695, 2010 | 8 | 2010 |
Bioinformatics for qualitative and quantitative proteomics C Bielow, C Gröpl, O Kohlbacher, K Reinert Bioinformatics for Omics Data: Methods and Protocols, 331-349, 2011 | 6 | 2011 |
OpenMS 3 enables reproducible analysis of large-scale mass spectrometry data J Pfeuffer, C Bielow, S Wein, K Jeong, E Netz, A Walter, O Alka, L Nilse, ... Nature Methods, 1-3, 2024 | 1 | 2024 |
Quantification and simulation of liquid chromatography-mass spectrometry data C Bielow Freie Universität Berlin, 2012 | 1 | 2012 |
OpenMS 3 expands the frontiers of open-source computational mass spectrometry T Sachsenberg, J Pfeuffer, C Bielow, S Wein, K Jeong, E Netz, A Walter, ... | | 2023 |