| Parallel single-cell sequencing links transcriptional and epigenetic heterogeneity C Angermueller, SJ Clark, HJ Lee, IC Macaulay, MJ Teng, TX Hu, ... Nature methods 13 (3), 229-232, 2016 | 746 | 2016 |
| scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells SJ Clark, R Argelaguet, CA Kapourani, TM Stubbs, HJ Lee, ... Nature communications 9 (1), 1-9, 2018 | 623 | 2018 |
| Joint Profiling Of Chromatin Accessibility, DNA Methylation And Transcription In Single Cells SJ Clark, R Argelaguet, CA Kapourani, TM Stubbs, HJ Lee, F Krueger, ... bioRxiv, 138685, 2017 | 623* | 2017 |
| Multi-omics profiling of mouse gastrulation at single-cell resolution R Argelaguet, SJ Clark, H Mohammed, LC Stapel, C Krueger, ... Nature 576 (7787), 487-491, 2019 | 393 | 2019 |
| Single-cell epigenomics: powerful new methods for understanding gene regulation and cell identity SJ Clark, HJ Lee, SA Smallwood, G Kelsey, W Reik Genome biology 17 (1), 1-10, 2016 | 327 | 2016 |
| Genome-wide base-resolution mapping of DNA methylation in single cells using single-cell bisulfite sequencing (scBS-seq) SJ Clark, SA Smallwood, HJ Lee, F Krueger, W Reik, G Kelsey Nature protocols 12 (3), 534-547, 2017 | 246 | 2017 |
| Ageing affects DNA methylation drift and transcriptional cell-to-cell variability in mouse muscle stem cells I Hernando-Herraez, B Evano, T Stubbs, PH Commere, MJ Bonder, ... Nature communications 10 (1), 1-11, 2019 | 190 | 2019 |
| Genome-wide bisulfite sequencing in zygotes identifies demethylation targets and maps the contribution of TET3 oxidation JR Peat, W Dean, SJ Clark, F Krueger, SA Smallwood, G Ficz, JK Kim, ... Cell reports 9 (6), 1990-2000, 2014 | 139 | 2014 |
| Continuous histone replacement by Hira is essential for normal transcriptional regulation and de novo DNA methylation during mouse oogenesis B Nashun, PWS Hill, SA Smallwood, G Dharmalingam, R Amouroux, ... Molecular cell 60 (4), 611-625, 2015 | 123 | 2015 |
| Association of sirtuin 1 (SIRT1) gene SNPs and transcript expression levels with severe obesity SJ Clark, M Falchi, B Olsson, P Jacobson, S Cauchi, B Balkau, M Marre, ... Obesity 20 (1), 178-185, 2012 | 92 | 2012 |
| Genome-scale oscillations in DNA methylation during exit from pluripotency S Rulands, HJ Lee, SJ Clark, C Angermueller, SA Smallwood, F Krueger, ... Cell systems 7 (1), 63-76. e12, 2018 | 86 | 2018 |
| Combined single-cell profiling of expression and DNA methylation reveals splicing regulation and heterogeneity SM Linker, L Urban, SJ Clark, M Chhatriwala, S Amatya, DJ McCarthy, ... Genome biology 20 (1), 1-14, 2019 | 69 | 2019 |
| The role of ZFP57 and additional KRAB-zinc finger proteins in the maintenance of human imprinted methylation and multi-locus imprinting disturbances A Monteagudo-Sánchez, JR Hernandez Mora, C Simon, A Burton, ... Nucleic acids research 48 (20), 11394-11407, 2020 | 46 | 2020 |
| Increased transcriptome variation and localised DNA methylation changes in oocytes from aged mice revealed by parallel single‐cell analysis J Castillo‐Fernandez, E Herrera‐Puerta, H Demond, SJ Clark, CW Hanna, ... Aging cell 19 (12), e13278, 2020 | 38 | 2020 |
| Single cell multi-omics profiling reveals a hierarchical epigenetic landscape during mammalian germ layer specification R Argelaguet, H Mohammed, S Clark, C Stapel, C Krueger, CA Kapourani, ... bioRxiv, 519207, 2019 | 16 | 2019 |
| Ageing affects DNA methylation drift and transcriptional cell-to-cell variability in muscle stem cells I Hernando-Herraez, B Evano, T Stubbs, PH Commere, S Clark, ... bioRxiv, 500900, 2018 | 6 | 2018 |
| Inference of emergent spatio-temporal processes from single-cell sequencing reveals feedback between de novo DNA methylation and chromatin condensates F Olmeda, T Lohoff, S Clark, L Benson, F Krueger, W Reik, S Rulands bioRxiv, 2020.12. 30.424823, 2021 | 5 | 2021 |
| Enhancer priming by H3K4 methylation safeguards germline competence T Bleckwehl, K Schaaf, G Crispatzu, P Respuela, M Bartusel, L Benson, ... bioRxiv, 2020 | 3 | 2020 |
| Dppa2/4 target chromatin bivalency enabling multi-lineage commitment MA Eckersley-Maslin, A Parry, M Blotenburg, C Krueger, VNR Franklin, ... bioRxiv, 832873, 2019 | 2 | 2019 |
| Inference of emergent spatio-temporal processes in single-cell genomics F Olmeda, T Lohoff, S Clark, L Benson, F Krueger, W Reik, S Rulands Bulletin of the American Physical Society, 2021 | | 2021 |
