| A single-cell atlas of entorhinal cortex from individuals with Alzheimer’s disease reveals cell-type-specific gene expression regulation A Grubman, G Chew, JF Ouyang, G Sun, XY Choo, C McLean, ... Nature neuroscience 22 (12), 2087-2097, 2019 | 778 | 2019 |
| Modelling human blastocysts by reprogramming fibroblasts into iBlastoids X Liu, JP Tan, J Schröder, A Aberkane, JF Ouyang, M Mohenska, SM Lim, ... Nature 591 (7851), 627-632, 2021 | 307 | 2021 |
| Transcriptional signature in microglia associated with Aβ plaque phagocytosis A Grubman, XY Choo, G Chew, JF Ouyang, G Sun, NP Croft, FJ Rossello, ... Nature communications 12 (1), 3015, 2021 | 222 | 2021 |
| Reprogramming roadmap reveals route to human induced trophoblast stem cells X Liu, JF Ouyang, FJ Rossello, JP Tan, KC Davidson, DS Valdes, ... Nature 586 (7827), 101-107, 2020 | 173 | 2020 |
| Functional annotation of human long noncoding RNAs via molecular phenotyping JA Ramilowski, CW Yip, S Agrawal, JC Chang, Y Ciani, IV Kulakovskiy, ... Genome research 30 (7), 1060-1072, 2020 | 152 | 2020 |
| ShinyCell: simple and sharable visualization of single-cell gene expression data JF Ouyang, US Kamaraj, EY Cao, OJL Rackham Bioinformatics 37 (19), 3374-3376, 2021 | 133 | 2021 |
| deltaTE: Detection of translationally regulated genes by integrative analysis of Ribo‐seq and RNA‐seq data S Chothani, E Adami, JF Ouyang, S Viswanathan, N Hubner, SA Cook, ... Current protocols in molecular biology 129 (1), e108, 2019 | 109 | 2019 |
| Combined fragmentation method: A simple method for fragmentation of large molecules HA Le, HJ Tan, JF Ouyang, RPA Bettens Journal of chemical theory and computation 8 (2), 469-478, 2012 | 98 | 2012 |
| Modelling water: A lifetime enigma JF Ouyang, RPA Bettens Chimia 69 (3), 104-104, 2015 | 89 | 2015 |
| A high-resolution map of human RNA translation SP Chothani, E Adami, AA Widjaja, SR Langley, S Viswanathan, CJ Pua, ... Molecular cell 82 (15), 2885-2899. e8, 2022 | 71 | 2022 |
| Trouble with the many-body expansion JF Ouyang, MW Cvitkovic, RPA Bettens Journal of chemical theory and computation 10 (9), 3699-3707, 2014 | 68 | 2014 |
| Many-body basis set superposition effect JF Ouyang, RPA Bettens Journal of chemical theory and computation 11 (11), 5132-5143, 2015 | 53 | 2015 |
| The MURAL collection of prostate cancer patient-derived xenografts enables discovery through preclinical models of uro-oncology GP Risbridger, AK Clark, LH Porter, R Toivanen, A Bakshi, NL Lister, ... Nature communications 12 (1), 5049, 2021 | 51 | 2021 |
| Single cell analysis in head and neck cancer reveals potential immune evasion mechanisms during early metastasis HS Quah, EY Cao, L Suteja, CH Li, HS Leong, FT Chong, S Gupta, ... Nature Communications 14 (1), 1680, 2023 | 46 | 2023 |
| When are many-body effects significant? JF Ouyang, RPA Bettens Journal of chemical theory and computation 12 (12), 5860-5867, 2016 | 41 | 2016 |
| Transient naive reprogramming corrects hiPS cells functionally and epigenetically S Buckberry, X Liu, D Poppe, JP Tan, G Sun, J Chen, TV Nguyen, ... Nature 620 (7975), 863-872, 2023 | 34 | 2023 |
| GeneSwitches: ordering gene expression and functional events in single-cell experiments EY Cao, JF Ouyang, OJL Rackham Bioinformatics 36 (10), 3273-3275, 2020 | 33 | 2020 |
| A single-cell atlas identifies pretreatment features of primary imatinib resistance in chronic myeloid leukemia V Krishnan, F Schmidt, Z Nawaz, PN Venkatesh, KL Lee, X Ren, ZE Chan, ... Blood, The Journal of the American Society of Hematology 141 (22), 2738-2755, 2023 | 20 | 2023 |
| Systems level identification of a matrisome-associated macrophage polarisation state in multi-organ fibrosis JF Ouyang, K Mishra, Y Xie, H Park, KY Huang, E Petretto, J Behmoaras Elife 12, e85530, 2023 | 16 | 2023 |
| EpiMogrify models H3K4me3 data to identify signaling molecules that improve cell fate control and maintenance US Kamaraj, J Chen, K Katwadi, JF Ouyang, YBY Sun, YM Lim, X Liu, ... Cell Systems 11 (5), 509-522. e10, 2020 | 15 | 2020 |
Owen RackhamUniversity of SouthamptonVerified email at soton.ac.uk
