Intestinal microbiota distinguish gout patients from healthy humans Z Guo, J Zhang, Z Wang, KY Ang, S Huang, Q Hou, X Su, J Qiao, Y Zheng, ... Scientific reports 6 (1), 20602, 2016 | 357 | 2016 |
Feed-additive probiotics accelerate yet antibiotics delay intestinal microbiota maturation in broiler chicken P Gao, C Ma, Z Sun, L Wang, S Huang, X Su, J Xu, H Zhang Microbiome 5, 1-14, 2017 | 302 | 2017 |
Nannochloropsis Genomes Reveal Evolution of Microalgal Oleaginous Traits D Wang, K Ning, J Li, J Hu, D Han, H Wang, X Zeng, X Jing, Q Zhou, X Su, ... PLoS genetics 10 (1), e1004094, 2014 | 271 | 2014 |
Genomic Foundation of Starch-to-Lipid Switch in Oleaginous Chlorella spp. J Fan, K Ning, X Zeng, Y Luo, D Wang, J Hu, J Li, H Xu, J Huang, M Wan, ... Plant Physiology 169 (4), 2444-2461, 2015 | 145 | 2015 |
Cow-to-mouse fecal transplantations suggest intestinal microbiome as one cause of mastitis C Ma, Z Sun, B Zeng, S Huang, J Zhao, Y Zhang, X Su, J Xu, H Wei, ... Microbiome 6, 1-17, 2018 | 130 | 2018 |
Biological ingredient analysis of traditional Chinese medicine preparation based on high-throughput sequencing: the story for Liuwei Dihuang Wan X Cheng, X Su, X Chen, H Zhao, C Bo, J Xu, H Bai, K Ning Scientific reports 4 (1), 5147, 2014 | 129 | 2014 |
Parallel-META 3: comprehensive taxonomical and functional analysis platform for efficient comparison of microbial communities G Jing, Z Sun, H Wang, Y Gong, S Huang, K Ning, J Xu, X Su Scientific reports 7 (1), 40371, 2017 | 121 | 2017 |
QC-Chain: fast and holistic quality control method for next-generation sequencing data Q Zhou, X Su, A Wang, J Xu, K Ning PloS one 8 (4), e60234, 2013 | 108 | 2013 |
Parallel-META 2.0: enhanced metagenomic data analysis with functional annotation, high performance computing and advanced visualization X Su, W Pan, B Song, J Xu, K Ning PloS one 9 (3), e89323, 2014 | 82 | 2014 |
Nannochloropsis plastid and mitochondrial phylogenomes reveal organelle diversification mechanism and intragenus phylotyping strategy in microalgae L Wei, Y Xin, D Wang, X Jing, Q Zhou, X Su, J Jia, K Ning, F Chen, Q Hu, ... BMC genomics 14, 1-17, 2013 | 70 | 2013 |
Meta-Storms: efficient search for similar microbial communities based on a novel indexing scheme and similarity score for metagenomic data X Su, J Xu, K Ning Bioinformatics 28 (19), 2493-2501, 2012 | 67 | 2012 |
Assessment of quality control approaches for metagenomic data analysis Q Zhou, X Su, K Ning Scientific reports 4 (1), 6957, 2014 | 65 | 2014 |
RNA-QC-chain: comprehensive and fast quality control for RNA-Seq data Q Zhou, X Su, G Jing, S Chen, K Ning BMC genomics 19, 1-10, 2018 | 63 | 2018 |
Comparative gut microbiomes of four species representing the higher and the lower termites LJ Su, LL Yang, S Huang, XQ Su, Y Li, FQ Wang, ET Wang, N Kang, J Xu, ... Journal of Insect Science 16 (1), 97, 2016 | 63 | 2016 |
Parallel-META: efficient metagenomic data analysis based on high-performance computation X Su, J Xu, K Ning BMC systems biology 6, 1-11, 2012 | 59 | 2012 |
The oral microbiome bank of China P Xian, Z Xuedong, X Xin, L Yuqing, L Yan, L Jiyao, S Xiaoquan, H Shi, ... International journal of oral science 10 (2), 16, 2018 | 54 | 2018 |
Longitudinal multi-omics and microbiome meta-analysis identify an asymptomatic gingival state that links gingivitis, periodontitis, and aging S Huang, T He, F Yue, X Xu, L Wang, P Zhu, F Teng, Z Sun, X Liu, G Jing, ... MBio 12 (2), 10.1128/mbio. 03281-20, 2021 | 44 | 2021 |
Emerging trends for microbiome analysis: from single-cell functional imaging to microbiome big data J Xu, B Ma, X Su, S Huang, X Xu, X Zhou, WE Huang, R Knight Engineering 3 (1), 66-70, 2017 | 41 | 2017 |
Elucidating the Beta-Diversity of the Microbiome: from Global Alignment to Local Alignment X Su mSystems 6 (4), e00363-21, 2021 | 38 | 2021 |
GPU-Meta-Storms: computing the structure similarities among massive amount of microbial community samples using GPU X Su, X Wang, G Jing, K Ning Bioinformatics 30 (7), 1031-1033, 2014 | 35 | 2014 |