Engin Cukuroglu
Engin Cukuroglu
Genome Institute of Singapore
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Cited by
Cited by
Midbrain-like organoids from human pluripotent stem cells contain functional dopaminergic and neuromelanin-producing neurons
J Jo, Y Xiao, AX Sun, E Cukuroglu, HD Tran, J Göke, ZY Tan, TY Saw, ...
Cell stem cell 19 (2), 248-257, 2016
PRISM: a web server and repository for prediction of protein–protein interactions and modeling their 3D complexes
A Baspinar, E Cukuroglu, R Nussinov, O Keskin, A Gursoy
Nucleic acids research 42 (W1), W285-W289, 2014
Hot spots in protein–protein interfaces: Towards drug discovery
E Cukuroglu, HB Engin, A Gursoy, O Keskin
Progress in biophysics and molecular biology 116 (2-3), 165-173, 2014
A pan-cancer transcriptome analysis reveals pervasive regulation through alternative promoters
D Demircioğlu, E Cukuroglu, M Kindermans, T Nandi, C Calabrese, ...
Cell 178 (6), 1465-1477. e17, 2019
HotRegion: a database of predicted hot spot clusters
E Cukuroglu, A Gursoy, O Keskin
Nucleic acids research 40 (D1), D829-D833, 2012
Tumor-associated B cells and humoral immune response in head and neck squamous cell carcinoma
A Lechner, HA Schlößer, M Thelen, K Wennhold, SI Rothschild, R Gilles, ...
Oncoimmunology 8 (3), 1535293, 2019
Molecular features underlying neurodegeneration identified through in vitro modeling of genetically diverse Parkinson’s disease patients
L Lin, J Göke, E Cukuroglu, MR Dranias, AMJ VanDongen, LW Stanton
Cell reports 15 (11), 2411-2426, 2016
Non-redundant unique interface structures as templates for modeling protein interactions
E Cukuroglu, A Gursoy, R Nussinov, O Keskin
PloS one 9 (1), e86738, 2014
SRSF3 maintains transcriptome integrity in oocytes by regulation of alternative splicing and transposable elements
DV Do, B Strauss, E Cukuroglu, I Macaulay, KB Wee, TX Hu, RDLM Igor, ...
Cell discovery 4 (1), 33, 2018
B cells in esophago-gastric adenocarcinoma are highly differentiated, organize in tertiary lymphoid structures and produce tumor-specific antibodies
HA Schlößer, M Thelen, A Lechner, K Wennhold, MA Garcia-Marquez, ...
Oncoimmunology 8 (1), e1512458, 2019
Analysis of hot region organization in hub proteins
E Cukuroglu, A Gursoy, O Keskin
Annals of biomedical engineering 38, 2068-2078, 2010
Histone modifications and p53 binding poise the p21 promoter for activation in human embryonic stem cells
Y Itahana, J Zhang, J Göke, LA Vardy, R Han, K Iwamoto, E Cukuroglu, ...
Scientific Reports 6 (1), 28112, 2016
A chemically defined feeder-free system for the establishment and maintenance of the human naive pluripotent state
I Szczerbinska, KAU Gonzales, E Cukuroglu, MNB Ramli, BPG Lee, ...
Stem Cell Reports 13 (4), 612-626, 2019
EZH2 promotes neoplastic transformation through VAV interaction-dependent extranuclear mechanisms
N Venkatesan, JF Wong, KP Tan, HH Chung, YH Yau, E Cukuroglu, ...
Oncogene 37 (4), 461-477, 2018
Enriching traditional protein-protein interaction networks with alternative conformations of proteins
F Halakou, ES Kilic, E Cukuroglu, O Keskin, A Gursoy
Scientific Reports 7 (1), 7180, 2017
An ontology-based method for assessing batch effect adjustment approaches in heterogeneous datasets
F Schmidt, M List, E Cukuroglu, S Köhler, J Göke, MH Schulz
Bioinformatics 34 (17), i908-i916, 2018
Go ̈ ke, J., Tan, ZY, Saw, TY, Tan, C.-P., Lokman, H. et al.(2016). Midbrain-like organoids from human pluripotent stem cells contain functional dopaminergic and …
J Jo, Y Xiao, AX Sun, E Cukuroglu, HD Tran
Cell Stem Cell 19, 248-257, 0
A Pan-Cancer Transcriptome Analysis Reveals Pervasive Regulation through Tumor-Associated Alternative Promoters
D Demircioğlu, M Kindermans, T Nandi, E Cukuroglu, C Calabrese, ...
Disrupting interactions between β-catenin and activating TCFs reconstitutes ground state pluripotency in mouse embryonic stem cells
A Saj, SS Chatterjee, B Zhu, E Cukuroglu, T Gocha, X Zhang, J Göke, ...
Stem Cells 35 (8), 1924-1933, 2017
Hot spots in proteineprotein interfaces: Towards drug discovery
E Cukuroglu, HB Engin, A Gursoy, O Keskin
Progress in Biophysics and Molecular Biology 30, 1e9, 2014
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