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Hugues Richard
Hugues Richard
Robert Koch Institute (Researcher) / Sorbonne University (Ass. Prof., on leave)
Verified email at upmc.fr - Homepage
Title
Cited by
Cited by
Year
A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome
M Sultan, MH Schulz, H Richard, A Magen, A Klingenhoff, M Scherf, ...
Science 321 (5891), 956-960, 2008
16012008
The genome of a songbird
WC Warren, DF Clayton, H Ellegren, AP Arnold, LDW Hillier, A Künstner, ...
Nature 464 (7289), 757-762, 2010
9802010
Assessment of transcript reconstruction methods for RNA-seq
T Steijger, JF Abril, PG Engström, F Kokocinski, M Akerman, T Alioto, ...
Nature methods 10 (12), 1177-1184, 2013
7922013
X-exome sequencing of 405 unresolved families identifies seven novel intellectual disability genes
H Hu, SA Haas, J Chelly, H Van Esch, M Raynaud, APM de Brouwer, ...
Molecular psychiatry 21 (1), 133-148, 2016
3192016
A global metagenomic map of urban microbiomes and antimicrobial resistance
D Danko, D Bezdan, EE Afshin, S Ahsanuddin, C Bhattacharya, DJ Butler, ...
Cell 184 (13), 3376-3393. e17, 2021
2602021
Prediction of alternative isoforms from exon expression levels in RNA-Seq experiments
H Richard, MH Schulz, M Sultan, A Nurnberger, S Schrinner, D Balzereit, ...
Nucleic acids research 38 (10), e112-e112, 2010
2092010
Prediction of alternative isoforms from exon expression levels in RNA-Seq experiments
H Richard, MH Schulz, M Sultan, A Nurnberger, S Schrinner, D Balzereit, ...
Nucleic acids research 38 (10), e112-e112, 2010
2092010
PureCLIP: capturing target-specific protein–RNA interaction footprints from single-nucleotide CLIP-seq data
S Krakau, H Richard, A Marsico
Genome biology 18, 1-17, 2017
1472017
Erratum to: Mutation screening in 86 known X-linked mental retardation genes by droplet-based multiplex PCR and massive parallel sequencing
H Hu, K Wrogemann, V Kalscheuer, A Tzschach, H Richard, SA Haas, ...
The HUGO journal 3 (1), 83-83, 2009
122*2009
Mutation screening in 86 known X-linked mental retardation genes by droplet-based multiplex PCR and massive parallel sequencing
H Hu, K Wrogemann, V Kalscheuer, A Tzschach, H Richard, SA Haas, ...
The HUGO journal 3, 41-49, 2009
1212009
Fiona: a parallel and automatic strategy for read error correction
MH Schulz, D Weese, M Holtgrewe, V Dimitrova, S Niu, K Reinert, ...
Bioinformatics 30 (17), i356-i363, 2014
972014
Comprehensive identification and quantification of microbial transcriptomes by genome-wide unbiased methods
U Mäder, P Nicolas, H Richard, P Bessières, S Aymerich
Current Opinion in Biotechnology 22 (1), 32-41, 2011
722011
Occurrence probability of structured motifs in random sequences
S Robin, JJ Daudin, H Richard, MF Sagot, S Schbath
Journal of Computational Biology 9 (6), 761-773, 2002
632002
The diversity of small non-coding RNAs in the diatom Phaeodactylum tricornutum
A Rogato, H Richard, A Sarazin, B Voss, SC Navarro, R Champeimont, ...
BMC Genomics 15 (1), 698, 2014
432014
Mutations in the gdpP gene are a clinically relevant mechanism for β-lactam resistance in meticillin-resistant Staphylococcus aureus lacking mec determinants
A Sommer, S Fuchs, F Layer, C Schaudinn, RE Weber, H Richard, ...
Microbial genomics 7 (9), 000623, 2021
382021
Global genetic cartography of urban metagenomes and anti-microbial resistance
D Danko, D Bezdan, E Afshinnekoo, S Ahsanuddin, C Bhattacharya, ...
BioRxiv, 724526, 2019
342019
Ulysses: accurate detection of low-frequency structural variations in large insert-size sequencing libraries
A Gillet-Markowska, H Richard, G Fischer, I Lafontaine
Bioinformatics 31 (6), 801-808, 2015
252015
Advancing Precision Vaccinology by Molecular and Genomic Surveillance of Severe Acute Respiratory Syndrome Coronavirus 2 in Germany, 2021
DY Oh, M Hölzer, S Paraskevopoulou, M Trofimova, F Hartkopf, M Budt, ...
Clinical infectious diseases 75 (Supplement_1), S110-S120, 2022
202022
Parseq: reconstruction of microbial transcription landscape from RNA-Seq read counts using state-space models
B Mirauta, P Nicolas, H Richard
Bioinformatics 30 (10), 1409-1416, 2014
182014
Assessing conservation of alternative splicing with evolutionary splicing graphs
DJ Zea, S Laskina, A Baudin, H Richard, E Laine
Genome Research 31 (8), 1462-1473, 2021
172021
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