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| The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration B Smith, M Ashburner, C Rosse, J Bard, W Bug, W Ceusters, LJ Goldberg, ... Nature biotechnology 25 (11), 1251-1255, 2007 | 3075 | 2007 |
| BioPortal: ontologies and integrated data resources at the click of a mouse NF Noy, NH Shah, PL Whetzel, B Dai, M Dorf, N Griffith, C Jonquet, ... Nucleic acids research 37 (suppl_2), W170-W173, 2009 | 1151 | 2009 |
| BioPortal: enhanced functionality via new Web services from the National Center for Biomedical Ontology to access and use ontologies in software applications PL Whetzel, NF Noy, NH Shah, PR Alexander, C Nyulas, T Tudorache, ... Nucleic acids research 39 (suppl_2), W541-W545, 2011 | 953 | 2011 |
| The NHGRI-EBI GWAS Catalog: knowledgebase and deposition resource E Sollis, A Mosaku, A Abid, A Buniello, M Cerezo, L Gil, T Groza, O Güneş, ... Nucleic acids research 51 (D1), D977-D985, 2023 | 713 | 2023 |
| PlasmoDB: the Plasmodium genome resource. A database integrating experimental and computational data A Bahl, B Brunk, J Crabtree, MJ Fraunholz, B Gajria, GR Grant, ... Nucleic acids research 31 (1), 212-215, 2003 | 454 | 2003 |
| The ontology for biomedical investigations A Bandrowski, R Brinkman, M Brochhausen, MH Brush, B Bug, ... PloS one 11 (4), e0154556, 2016 | 397 | 2016 |
| The national center for biomedical ontology MA Musen, NF Noy, NH Shah, PL Whetzel, CG Chute, MA Story, B Smith, ... Journal of the American Medical Informatics Association 19 (2), 190-195, 2012 | 273 | 2012 |
| A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB TF Rayner, P Rocca-Serra, PT Spellman, HC Causton, A Farne, ... BMC bioinformatics 7, 1-18, 2006 | 270 | 2006 |
| The MGED Ontology: a resource for semantics-based description of microarray experiments PL Whetzel, H Parkinson, HC Causton, L Fan, J Fostel, G Fragoso, ... Bioinformatics 22 (7), 866-873, 2006 | 266 | 2006 |
| The Plasmodium genome database JC Kissinger, BP Brunk, J Crabtree, MJ Fraunholz, B Gajria, AJ Milgram, ... Nature 419 (6906), 490-492, 2002 | 202 | 2002 |
| High-performance web services for querying gene and variant annotation J Xin, A Mark, C Afrasiabi, G Tsueng, M Juchler, N Gopal, GS Stupp, ... Genome biology 17, 1-7, 2016 | 193 | 2016 |
| The Functional Genomics Experiment model (FuGE): an extensible framework for standards in functional genomics AR Jones, M Miller, R Aebersold, R Apweiler, CA Ball, A Brazma, ... Nature Biotechnology 25 (10), 1127-1133, 2007 | 132 | 2007 |
| The Translational Medicine Ontology and Knowledge Base: driving personalized medicine by bridging the gap between bench and bedside JS Luciano, B Andersson, C Batchelor, O Bodenreider, T Clark, ... Journal of biomedical semantics 2, 1-21, 2011 | 116 | 2011 |
| Cloning and characterization of a putative cytadhesin gene (mgc1) from Mycoplasma gallisepticum CL Keeler Jr, LL Hnatow, PL Whetzel, JE Dohms Infection and immunity 64 (5), 1541-1547, 1996 | 83 | 1996 |
| Development of FuGO: an ontology for functional genomics investigations PL Whetzel, RR Brinkman, HC Causton, L Fan, D Field, J Fostel, ... OMICS: A journal of integrative biology 10 (2), 199-204, 2006 | 77 | 2006 |
| NCBO Technology: Powering semantically aware applications PL Whetzel, NCBO Team Journal of biomedical semantics 4 (Suppl 1), S8, 2013 | 70 | 2013 |
| BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains T Katayama, MD Wilkinson, KF Aoki-Kinoshita, S Kawashima, ... Journal of biomedical semantics 5, 1-13, 2014 | 69 | 2014 |
| Towards BioDBcore: a community-defined information specification for biological databases P Gaudet, A Bairoch, D Field, SA Sansone, C Taylor, TK Attwood, ... Database 2011, baq027, 2011 | 69 | 2011 |
| OntoMaton: a bioportal powered ontology widget for Google Spreadsheets E Maguire, A González-Beltrán, PL Whetzel, SA Sansone, P Rocca-Serra Bioinformatics 29 (4), 525-527, 2013 | 67 | 2013 |
