| The Parkinson's disease protein DJ-1 is neuroprotective due to cysteine-sulfinic acid-driven mitochondrial localization RM Canet-Avilés, MA Wilson, DW Miller, R Ahmad, C McLendon, ... Proceedings of the National Academy of Sciences 101 (24), 9103-9108, 2004 | 1390 | 2004 |
| Global analysis of host-pathogen interactions that regulate early-stage HIV-1 replication R König, Y Zhou, D Elleder, TL Diamond, GMC Bonamy, JT Irelan, ... Cell 135 (1), 49-60, 2008 | 1198 | 2008 |
| Human host factors required for influenza virus replication R König, S Stertz, Y Zhou, A Inoue, HH Hoffmann, S Bhattacharyya, ... Nature 463 (7282), 813-817, 2010 | 984 | 2010 |
| Rewiring of genetic networks in response to DNA damage S Bandyopadhyay, M Mehta, D Kuo, MK Sung, R Chuang, EJ Jaehnig, ... Science 330 (6009), 1385-1389, 2010 | 547 | 2010 |
| Host cell factors in HIV replication: meta-analysis of genome-wide studies FD Bushman, N Malani, J Fernandes, I D'Orso, G Cagney, TL Diamond, ... PLoS pathogens 5 (5), e1000437, 2009 | 533 | 2009 |
| Conservation and rewiring of functional modules revealed by an epistasis map in fission yeast A Roguev, S Bandyopadhyay, M Zofall, K Zhang, T Fischer, SR Collins, ... science 322 (5900), 405-410, 2008 | 408 | 2008 |
| A genetic interaction map of RNA-processing factors reveals links between Sem1/Dss1-containing complexes and mRNA export and splicing GM Wilmes, M Bergkessel, S Bandyopadhyay, M Shales, H Braberg, ... Molecular cell 32 (5), 735-746, 2008 | 303 | 2008 |
| Systematic identification of functional orthologs based on protein network comparison S Bandyopadhyay, R Sharan, T Ideker Genome research 16 (3), 428-435, 2006 | 273 | 2006 |
| Aurora kinase A drives the evolution of resistance to third-generation EGFR inhibitors in lung cancer KN Shah, R Bhatt, J Rotow, J Rohrberg, V Olivas, VE Wang, G Hemmati, ... Nature medicine 25 (1), 111-118, 2019 | 265 | 2019 |
| Integrating physical and genetic maps: from genomes to interaction networks A Beyer, S Bandyopadhyay, T Ideker Nature reviews genetics 8 (9), 699-710, 2007 | 244 | 2007 |
| A human MAP kinase interactome S Bandyopadhyay, C Chiang, J Srivastava, M Gersten, S White, R Bell, ... Nature methods 7 (10), 801-805, 2010 | 243 | 2010 |
| Evolutionarily conserved herpesviral protein interaction networks E Fossum, CC Friedel, SV Rajagopala, B Titz, A Baiker, T Schmidt, ... PLoS pathogens 5 (9), e1000570, 2009 | 233 | 2009 |
| NF-κB-activating complex engaged in response to EGFR oncogene inhibition drives tumor cell survival and residual disease in lung cancer CM Blakely, E Pazarentzos, V Olivas, S Asthana, JJ Yan, I Tan, ... Cell reports 11 (1), 98-110, 2015 | 231 | 2015 |
| Evolutionary and functional relationships within the DJ1 superfamily S Bandyopadhyay, MR Cookson BMC evolutionary biology 4, 1-9, 2004 | 206 | 2004 |
| Functional maps of protein complexes from quantitative genetic interaction data S Bandyopadhyay, R Kelley, NJ Krogan, T Ideker PLoS computational biology 4 (4), e1000065, 2008 | 174 | 2008 |
| Quantitative genetic-interaction mapping in mammalian cells A Roguev, D Talbot, GL Negri, M Shales, G Cagney, S Bandyopadhyay, ... Nature methods 10 (5), 432-437, 2013 | 132 | 2013 |
| Mapping the molecular determinants of BRAF oncogene dependence in human lung cancer L Lin, S Asthana, E Chan, S Bandyopadhyay, MM Martins, V Olivas, ... Proceedings of the National Academy of Sciences 111 (7), E748-E757, 2014 | 115 | 2014 |
| Epithelial-to-mesenchymal transition rewires the molecular path to PI3K-dependent proliferation MB Salt, S Bandyopadhyay, F McCormick Cancer discovery 4 (2), 186-199, 2014 | 114 | 2014 |
| Synthetic Lethal Targeting of ARID1A-Mutant Ovarian Clear Cell Tumors with Dasatinib RE Miller, R Brough, I Bajrami, CT Williamson, S McDade, J Campbell, ... Molecular cancer therapeutics 15 (7), 1472-1484, 2016 | 99 | 2016 |
| Kinome rewiring reveals AURKA limits PI3K-pathway inhibitor efficacy in breast cancer HJ Donnella, JT Webber, RS Levin, R Camarda, O Momcilovic, N Bayani, ... Nature chemical biology 14 (8), 768-777, 2018 | 93 | 2018 |
Trey IdekerUniversity of California San DiegoVerified email at ucsd.edu
