| Prediction of protein assemblies, the next frontier: The CASP14‐CAPRI experiment MF Lensink, G Brysbaert, T Mauri, N Nadzirin, S Velankar, RAG Chaleil, ... Proteins: Structure, Function, and Bioinformatics 89 (12), 1800-1823, 2021 | 81 | 2021 |
| Prediction of inter-chain distance maps of protein complexes with 2D attention-based deep neural networks Z Guo, J Liu, J Skolnick, J Cheng Nature communications 13 (1), 6963, 2022 | 47 | 2022 |
| Improving protein tertiary structure prediction by deep learning and distance prediction in CASP14 J Liu, T Wu, Z Guo, J Hou, J Cheng Proteins: Structure, Function, and Bioinformatics 90 (1), 58-72, 2022 | 21 | 2022 |
| Diffusion models in bioinformatics and computational biology Z Guo, J Liu, Y Wang, M Chen, D Wang, D Xu, J Cheng Nature reviews bioengineering 2 (2), 136-154, 2024 | 20* | 2024 |
| Modeling SARS‐CoV‐2 proteins in the CASP‐commons experiment A Kryshtafovych, J Moult, WM Billings, D Della Corte, K Fidelis, S Kwon, ... Proteins: Structure, Function, and Bioinformatics 89 (12), 1987-1996, 2021 | 19 | 2021 |
| Protein model accuracy estimation empowered by deep learning and inter-residue distance prediction in CASP14 X Chen, J Liu, Z Guo, T Wu, J Hou, J Cheng Scientific Reports 11 (1), 10943, 2021 | 18 | 2021 |
| Enhancing alphafold-multimer-based protein complex structure prediction with MULTICOM in CASP15 J Liu, Z Guo, T Wu, RS Roy, F Quadir, C Chen, J Cheng Communications Biology 6 (1), 1140, 2023 | 16 | 2023 |
| Impact of AlphaFold on structure prediction of protein complexes: the CASP15‐CAPRI experiment MF Lensink, G Brysbaert, N Raouraoua, PA Bates, M Giulini, RV Honorato, ... Proteins: Structure, Function, and Bioinformatics 91 (12), 1658-1683, 2023 | 15 | 2023 |
| CAID prediction portal: a comprehensive service for predicting intrinsic disorder and binding regions in proteins A Del Conte, A Bouhraoua, M Mehdiabadi, D Clementel, AM Monzon, ... Nucleic Acids Research 51 (W1), W62-W69, 2023 | 14 | 2023 |
| Detection and tracking of pigs in natural environments based on video analysis D Xiao, A Feng, J Liu International Journal of Agricultural and Biological Engineering 12 (4), 116-126, 2019 | 12 | 2019 |
| Improving AlphaFold2-based protein tertiary structure prediction with MULTICOM in CASP15 J Liu, Z Guo, T Wu, RS Roy, C Chen, J Cheng Communications Chemistry 6 (1), 188, 2023 | 10 | 2023 |
| Combining pairwise structural similarity and deep learning interface contact prediction to estimate protein complex model accuracy in CASP15 RS Roy, J Liu, N Giri, Z Guo, J Cheng Proteins: Structure, Function, and Bioinformatics 91 (12), 1889-1902, 2023 | 9 | 2023 |
| Fast motion detection for pigs based on video tracking D Xiao, A Feng, Q Yang, J Liu, Z Zhang Transactions of the CSAM 47 (10), 331-351, 2016 | 9 | 2016 |
| A gated graph transformer for protein complex structure quality assessment and its performance in CASP15 X Chen, A Morehead, J Liu, J Cheng Bioinformatics 39 (Supplement_1), i308-i317, 2023 | 8* | 2023 |
| Improving deep learning-based protein distance prediction in CASP14 Z Guo, T Wu, J Liu, J Hou, J Cheng Bioinformatics 37 (19), 3190-3196, 2021 | 8 | 2021 |
| Multi-head attention-based U-Nets for predicting protein domain boundaries using 1D sequence features and 2D distance maps S Mahmud, Z Guo, F Quadir, J Liu, J Cheng BMC bioinformatics 23 (1), 283, 2022 | 6 | 2022 |
| MULTICOM2 open-source protein structure prediction system powered by deep learning and distance prediction T Wu, J Liu, Z Guo, J Hou, J Cheng Scientific Reports 11 (1), 13155, 2021 | 6 | 2021 |
| EGR: Equivariant graph refinement and assessment of 3D protein complex structures A Morehead, X Chen, T Wu, J Liu, J Cheng arXiv preprint arXiv:2205.10390, 2022 | 5 | 2022 |
| Identification and preliminary characterization of conserved uncharacterized proteins from Chlamydomonas reinhardtii, Arabidopsis thaliana, and Setaria viridis EP Knoshaug, P Sun, A Nag, H Nguyen, EM Mattoon, N Zhang, J Liu, ... Plant Direct 7 (12), e527, 2023 | 2 | 2023 |
| Protein structure accuracy estimation using geometry‐complete perceptron networks A Morehead, J Liu, J Cheng Protein Science 33 (3), e4932, 2024 | 1 | 2024 |
Jianlin ChengCurators' Distinguished Professor and Thompson Distinguished Professor, University of MissouriVerified email at missouri.edu
