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John Metzcar
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A review of cell-based computational modeling in cancer biology
J Metzcar, Y Wang, R Heiland, P Macklin
JCO clinical cancer informatics 2, 1-13, 2019
3362019
A persistent invasive phenotype in post-hypoxic tumor cells is revealed by fate mapping and computational modeling
HL Rocha, I Godet, F Kurtoglu, J Metzcar, K Konstantinopoulos, S Bhoyar, ...
Iscience 24 (9), 2021
242021
Hereditary endocrine tumours: current state-of-the-art and research opportunities: MEN1-related pancreatic NETs: identification of unmet clinical needs and future directives
CR Pieterman, SM Sadowski, JE Maxwell, MH Katz, KE Lines, ...
Endocrine-related cancer 27 (8), 2020
13*2020
A Review of Cell-Based Computational Modeling in Cancer Biology. JCO Clinical Cancer Informatics. 2019;(3): 1–13
J Metzcar, Y Wang, R Heiland, P Macklin
13
A review of cell-based computational modeling in cancer biology. JCO Clin Cancer Inform 2 (3): 1–13
J Metzcar, Y Wang, R Heiland, P Macklin
72019
Digitize your Biology! Modeling multicellular systems through interpretable cell behavior
JAI Johnson, GL Stein-O’Brien, M Booth, R Heiland, F Kurtoglu, ...
bioRxiv, 2023
52023
A review of cell-based computational modeling in cancer biology. JCO clinical cancer informatics. 2019; 2: 1–13
J Metzcar, Y Wang, R Heiland, P Macklin
5
A simple framework for agent-based modeling with extracellular matrix
J Metzcar, BS Duggan, B Fischer, M Murphy, R Heiland, P Macklin
BioRxiv, 2022.11. 21.514608, 2022
32022
DAPT: A package enabling distributed automated parameter testing
B Duggan, J Metzcar, P Macklin
Gigabyte 2021, 2021
32021
Demystifying the extracellular matrix: A review of current mathematical approaches and recent perspectives
RM Crossley, S Johnson, E Tsingos, Z Bell, M Berardi, M Botticelli, ...
arXiv preprint arXiv:2312.12365, 2023
12023
A review of mechanistic learning in mathematical oncology
J Metzcar, CR Jutzeler, P Macklin, A Köhn-Luque, SC Brüningk
Frontiers in Immunology 15, 1363144, 2024
2024
Modeling the extracellular matrix in cell migration and morphogenesis: a guide for the curious biologist
RM Crossley, S Johnson, E Tsingos, Z Bell, M Berardi, M Botticelli, ...
Frontiers in Cell and Developmental Biology 12, 1354132, 2024
2024
Accelerated solving of coupled, non-linear ODEs through LSTM-AI
C Faccini de Lima, J Ferrari Gianlupi, J Metzcar, J Zerick
arXiv e-prints, arXiv: 2009.08278, 2020
2020
Generating Turing-like patterns in an off-lattice agent based model: Handout
B Duggan, J Metzcar
Preprint, 2019
2019
Spatial Pattern Formation in Cell Based Models
B Duggan, J Metzcar
2019
Evaluating a Semi-discrete Approach to Tissue Simulation: Preliminary Results
J Metzcar
Indiana University, 2019
2019
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Articles 1–16