| Rapid whole-genome sequencing for investigation of a neonatal MRSA outbreak CU Köser, MTG Holden, MJ Ellington, EJP Cartwright, NM Brown, ... New England Journal of Medicine 366 (24), 2267-2275, 2012 | 795 | 2012 |
| Dense genomic sampling identifies highways of pneumococcal recombination C Chewapreecha, SR Harris, NJ Croucher, C Turner, P Marttinen, ... Nature genetics 46 (3), 305-309, 2014 | 413 | 2014 |
| Comprehensive identification of single nucleotide polymorphisms associated with beta-lactam resistance within pneumococcal mosaic genes C Chewapreecha, P Marttinen, NJ Croucher, SJ Salter, SR Harris, ... PLoS genetics 10 (8), e1004547, 2014 | 235 | 2014 |
| Sequence element enrichment analysis to determine the genetic basis of bacterial phenotypes JA Lees, M Vehkala, N Välimäki, SR Harris, C Chewapreecha, ... Nature communications 7 (1), 12797, 2016 | 224 | 2016 |
| Global and regional dissemination and evolution of Burkholderia pseudomallei C Chewapreecha, MTG Holden, M Vehkala, N Välimäki, Z Yang, ... Nature microbiology 2 (4), 1-8, 2017 | 171 | 2017 |
| Evidence for soft selective sweeps in the evolution of pneumococcal multidrug resistance and vaccine escape NJ Croucher, C Chewapreecha, WP Hanage, SR Harris, L McGee, ... Genome biology and evolution 6 (7), 1589-1602, 2014 | 135 | 2014 |
| Developing insights into the mechanisms of evolution of bacterial pathogens from whole-genome sequences J Bryant, C Chewapreecha, SD Bentley Future microbiology 7 (11), 1283-1296, 2012 | 129 | 2012 |
| Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis MJ Skwark, NJ Croucher, S Puranen, C Chewapreecha, M Pesonen, ... PLoS genetics 13 (2), e1006508, 2017 | 112 | 2017 |
| Melioidosis in Thailand: present and future S Hinjoy, V Hantrakun, S Kongyu, J Kaewrakmuk, T Wangrangsimakul, ... Tropical medicine and infectious disease 3 (2), 38, 2018 | 107 | 2018 |
| Pneumococcal Capsule Synthesis Locus cps as Evolutionary Hotspot with Potential to Generate Novel Serotypes by Recombination RJ Mostowy, NJ Croucher, N De Maio, C Chewapreecha, SJ Salter, ... Molecular biology and evolution 34 (10), 2537-2554, 2017 | 73 | 2017 |
| Climate induces seasonality in pneumococcal transmission E Numminen, C Chewapreecha, C Turner, D Goldblatt, F Nosten, ... Scientific reports 5 (1), 11344, 2015 | 71 | 2015 |
| Global Phylogenomic Analysis of Nonencapsulated Streptococcus pneumoniae Reveals a Deep-Branching Classic Lineage That Is Distinct from Multiple Sporadic … M Hilty, D Wüthrich, SJ Salter, H Engel, S Campbell, R Sá-Leão, ... Genome biology and evolution 6 (12), 3281-3294, 2014 | 58 | 2014 |
| Genetic characterisation of Malawian pneumococci prior to the roll-out of the PCV13 vaccine using a high-throughput whole genome sequencing approach DB Everett, J Cornick, B Denis, C Chewapreecha, N Croucher, S Harris, ... Public Library of Science 7 (9), e44250, 2012 | 55 | 2012 |
| Pneumococcal within-host diversity during colonization, transmission and treatment G Tonkin-Hill, C Ling, C Chaguza, SJ Salter, P Hinfonthong, E Nikolaou, ... Nature Microbiology 7 (11), 1791-1804, 2022 | 45 | 2022 |
| Genome-wide epistasis and co-selection study using mutual information J Pensar, S Puranen, B Arnold, N MacAlasdair, J Kuronen, G Tonkin-Hill, ... Nucleic acids research 47 (18), e112-e112, 2019 | 45 | 2019 |
| Horizontal gene transfer rate is not the primary determinant of observed antibiotic resistance frequencies in Streptococcus pneumoniae S Lehtinen, C Chewapreecha, J Lees, WP Hanage, M Lipsitch, ... Science advances 6 (21), eaaz6137, 2020 | 31 | 2020 |
| Two-phase importance sampling for inference about transmission trees E Numminen, C Chewapreecha, J Sirén, C Turner, P Turner, SD Bentley, ... Proceedings of the Royal Society B: Biological Sciences 281 (1794), 20141324, 2014 | 30 | 2014 |
| Genetic variation associated with infection and the environment in the accidental pathogen Burkholderia pseudomallei C Chewapreecha, AE Mather, SR Harris, M Hunt, MTG Holden, ... Communications Biology 2 (428), 2019 | 27 | 2019 |
| Your gut microbiota are what you eat C Chewapreecha Nature Reviews Microbiology 12 (1), 8-9, 2014 | 25 | 2014 |
| Antibiotic susceptibility of clinical Burkholderia pseudomallei isolates in northeast Thailand during 2015-2018 and the genomic characterization of β-lactam-resistant isolates. SHY Fen, S Tandhavanant, R Phunpang, P Ekchariyawat, N Saiprom, ... Antimicrobial agents and chemotherapy, AAC. 02230-20, 2021 | 21 | 2021 |
