Anisotropy of fluctuation dynamics of proteins with an elastic network model AR Atilgan, SR Durell, RL Jernigan, MC Demirel, O Keskin, I Bahar Biophysical journal 80 (1), 505-515, 2001 | 1843 | 2001 |
Direct evaluation of thermal fluctuations in proteins using a single-parameter harmonic potential I Bahar, AR Atilgan, B Erman Folding and Design 2 (3), 173-181, 1997 | 1635 | 1997 |
Vibrational dynamics of folded proteins: significance of slow and fast motions in relation to function and stability I Bahar, AR Atilgan, MC Demirel, B Erman Physical review letters 80 (12), 2733, 1998 | 512 | 1998 |
Dynamics of proteins predicted by molecular dynamics simulations and analytical approaches: Application to α‐amylase inhibitor P Doruker, AR Atilgan, I Bahar Proteins: Structure, Function, and Bioinformatics 40 (3), 512-524, 2000 | 391 | 2000 |
Small-world communication of residues and significance for protein dynamics AR Atilgan, P Akan, C Baysal Biophysical journal 86 (1), 85-91, 2004 | 387 | 2004 |
Collective motions in HIV-1 reverse transcriptase: examination of flexibility and enzyme function I Bahar, B Erman, RL Jernigan, AR Atilgan, DG Covell Journal of molecular biology 285 (3), 1023-1037, 1999 | 281 | 1999 |
Perturbation-response scanning reveals ligand entry-exit mechanisms of ferric binding protein C Atilgan, AR Atilgan PLoS computational biology 5 (10), e1000544, 2009 | 238 | 2009 |
Nonclassical behavior of thin‐walled composite beams with closed cross sections LW Rehfield, AR Atilgan, DH Hodges Journal of the American Helicopter Society 35 (2), 42-50, 1990 | 203 | 1990 |
On a simplified strain energy function for geometrically nonlinear behaviour of anisotropic beams DH Hodges, AR Atilgan, CES Cesnik, MV Fulton Composites Engineering 2 (5-7), 513-526, 1992 | 184 | 1992 |
Free‐Vibration analysis of composite beams DH Hodges, AR Atilgan, MV Fulton, LW Rehfield Journal of the American Helicopter Society 36 (3), 36-47, 1991 | 174 | 1991 |
Understanding the recognition of protein structural classes by amino acid composition I Bahar, AR Atilgan, RL Jernigan, B Erman Proteins: Structure, Function, and Bioinformatics 29 (2), 172-185, 1997 | 163 | 1997 |
Manipulation of conformational change in proteins by single-residue perturbations C Atilgan, ZN Gerek, SB Ozkan, AR Atilgan Biophysical journal 99 (3), 933-943, 2010 | 158 | 2010 |
MD-TASK: a software suite for analyzing molecular dynamics trajectories DK Brown, DL Penkler, O Sheik Amamuddy, C Ross, AR Atilgan, ... Bioinformatics 33 (17), 2768-2771, 2017 | 157 | 2017 |
Identification of kinetically hot residues in proteins MC Demirel, AR Atilgan, I Bahar, RL Jernigan, B Erman Protein Science 7 (12), 2522-2532, 1998 | 153 | 1998 |
A geometrically nonlinear theory of elastic plates DH Hodges, AR Atilgan, DA Danielson | 106 | 1993 |
Screened nonbonded interactions in native proteins manipulate optimal paths for robust residue communication AR Atilgan, D Turgut, C Atilgan Biophysical journal 92 (9), 3052-3062, 2007 | 81 | 2007 |
Unified nonlinear analysis for nonhomogeneous anisotropic beams withclosed cross sections AR Atilgan, DH Hodges AIAA journal 29 (11), 1990-1999, 1991 | 77 | 1991 |
High-order epistasis in catalytic power of dihydrofolate reductase gives rise to a rugged fitness landscape in the presence of trimethoprim selection YT Tamer, IK Gaszek, H Abdizadeh, TA Batur, KA Reynolds, AR Atilgan, ... Molecular biology and evolution 36 (7), 1533-1550, 2019 | 69 | 2019 |
Toward understanding the tailoring mechanisms for thin-walled composite tubular beams LW Rehfield, AR Atilgan, SW Tsai, JM Whitney Proceedings of the First USSR-US Symposium on Mechanics of Composite …, 1989 | 58 | 1989 |
Network-based models as tools hinting at nonevident protein functionality C Atilgan, OB Okan, AR Atilgan Annual review of biophysics 41 (1), 205-225, 2012 | 57 | 2012 |