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Sam Buckberry
Sam Buckberry
Verified email at telethonkids.org.au - Homepage
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Year
A single-cell atlas of entorhinal cortex from individuals with Alzheimer’s disease reveals cell-type-specific gene expression regulation
A Grubman, G Chew, JF Ouyang, G Sun, XY Choo, C McLean, ...
Nature Neuroscience, 1-11, 2019
6832019
Transcriptional signature in microglia associated with Aβ plaque phagocytosis
A Grubman, XY Choo, G Chew, JF Ouyang, G Sun, NP Croft, FJ Rossello, ...
Nature communications 12 (1), 3015, 2021
1802021
Integrative transcriptome meta-analysis reveals widespread sex-biased gene expression at the human fetal–maternal interface
S Buckberry, T Bianco-Miotto, SJ Bent, GA Dekker, CT Roberts
Molecular human reproduction 20 (8), 810-819, 2014
1692014
Reprogramming roadmap reveals route to human induced trophoblast stem cells
X Liu, JF Ouyang, FJ Rossello, JP Tan, KC Davidson, DS Valdes, ...
Nature 586 (7827), 101-107, 2020
1562020
Transient and permanent reconfiguration of chromatin and transcription factor occupancy drive reprogramming
AS Knaupp, S Buckberry, J Pflueger, SM Lim, E Ford, MR Larcombe, ...
Cell stem cell 21 (6), 834-845. e6, 2017
1182017
Large scale gene expression meta-analysis reveals tissue-specific, sex-biased gene expression in humans
BT Mayne, T Bianco-Miotto, S Buckberry, J Breen, V Clifton, C Shoubridge, ...
Frontiers in genetics 7, 183, 2016
1152016
The emergence of the brain non-CpG methylation system in vertebrates
A de Mendoza, D Poppe, S Buckberry, J Pflueger, CB Albertin, T Daish, ...
Nature ecology & evolution 5 (3), 369-378, 2021
772021
Recent progress towards understanding the role of DNA methylation in human placental development
T Bianco-Miotto, BT Mayne, S Buckberry, J Breen, CMR Lopez, ...
Reproduction 152 (1), R23-R30, 2016
762016
Hypoxia induced HIF-1/HIF-2 activity alters trophoblast transcriptional regulation and promotes invasion
AR Highet, SM Khoda, S Buckberry, S Leemaqz, T Bianco-Miotto, ...
European journal of cell biology 94 (12), 589-602, 2015
752015
Human prefrontal cortex gene regulatory dynamics from gestation to adulthood at single-cell resolution
CA Herring, RK Simmons, S Freytag, D Poppe, JJD Moffet, J Pflueger, ...
Cell 185 (23), 4428-4447. e28, 2022
642022
Convergent evolution of a vertebrate-like methylome in a marine sponge
A de Mendoza, WL Hatleberg, K Pang, S Leininger, O Bogdanovic, ...
Nature ecology & evolution 3 (10), 1464-1473, 2019
572019
Recurrent acquisition of cytosine methyltransferases into eukaryotic retrotransposons
A de Mendoza, A Bonnet, DB Vargas-Landin, N Ji, H Li, F Yang, L Li, ...
Nature communications 9 (1), 1341, 2018
572018
Cell type of origin dictates the route to pluripotency
CM Nefzger, FJ Rossello, J Chen, X Liu, AS Knaupp, J Firas, JM Paynter, ...
Cell reports 21 (10), 2649-2660, 2017
562017
Zinc is a critical regulator of placental morphogenesis and maternal hemodynamics during pregnancy in mice
RL Wilson, SY Leemaqz, Z Goh, D McAninch, T Jankovic-Karasoulos, ...
Scientific reports 7 (1), 15137, 2017
482017
Large-scale manipulation of promoter DNA methylation reveals context-specific transcriptional responses and stability
A de Mendoza, TV Nguyen, E Ford, D Poppe, S Buckberry, J Pflueger, ...
Genome Biology 23 (1), 163, 2022
472022
Imprinted and X-linked non-coding RNAs as potential regulators of human placental function
S Buckberry, T Bianco-Miotto, CT Roberts
epigenetics 9 (1), 81-89, 2014
472014
Quantitative Allele-Specific Expression and DNA Methylation Analysis of H19, IGF2 and IGF2R in the Human Placenta across Gestation Reveals H19 Imprinting …
S Buckberry, T Bianco-Miotto, S Hiendleder, CT Roberts
PLoS One 7 (12), e51210, 2012
442012
massiR : a method for predicting the sex of samples in gene expression microarray datasets
S Buckberry, SJ Bent, T Bianco-Miotto, CT Roberts
Bioinformatics 30 (14), 2084-2085, 2014
332014
Vitamin D receptor gene ablation in the conceptus has limited effects on placental morphology, function and pregnancy outcome
RL Wilson, S Buckberry, F Spronk, JA Laurence, S Leemaqz, S O’Leary, ...
PloS one 10 (6), e0131287, 2015
322015
Placental transcriptome co-expression analysis reveals conserved regulatory programs across gestation
S Buckberry, T Bianco-Miotto, SJ Bent, V Clifton, C Shoubridge, ...
BMC genomics 18, 1-13, 2017
312017
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