Jorge González-Domínguez
Jorge González-Domínguez
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Communication avoiding and overlapping for numerical linear algebra
E Georganas, J González-Domínguez, E Solomonik, Y Zheng, J Tourino, ...
SC'12: Proceedings of the International Conference on High Performance …, 2012
Multithreaded and Spark parallelization of feature selection filters
C Eiras-Franco, V Bolón-Canedo, S Ramos, J González-Domínguez, ...
Journal of Computational Science 17, 609-619, 2016
ParDRe: faster parallel duplicated reads removal tool for sequencing studies
J González-Domínguez, B Schmidt
Bioinformatics 32 (10), 1562-1564, 2016
GPU-accelerated exhaustive search for third-order epistatic interactions in case–control studies
J González-Domínguez, B Schmidt
Journal of Computational Science 8, 93-100, 2015
Servet: A benchmark suite for autotuning on multicore clusters
J González-Domínguez, GL Taboada, BB Fragüela, MJ Martín, J Tourino
2010 IEEE International Symposium on Parallel & Distributed Processing …, 2010
Parallel Programming: Concepts and Practice
B Schmidt, J Gonzalez-Dominguez, C Hundt, M Schlarb
Morgan Kaufmann, 2017
FPGA-based acceleration of detecting statistical epistasis in GWAS
L Wienbrandt, JC Kässens, J González-Domínguez, B Schmidt, ...
Procedia Computer Science 29, 220-230, 2014
Parallelizing epistasis detection in GWAS on FPGA and GPU-accelerated computing systems
J González-Domínguez, L Wienbrandt, JC Kässens, D Ellinghaus, ...
IEEE/ACM transactions on computational biology and bioinformatics 12 (5 …, 2015
MSAProbs-MPI: parallel multiple sequence aligner for distributed-memory systems
J González-Domínguez, Y Liu, J Touriño, B Schmidt
Bioinformatics 32 (24), 3826-3828, 2016
High-speed exhaustive 3-locus interaction epistasis analysis on FPGAs
JC Kässens, L Wienbrandt, J González-Domínguez, B Schmidt, ...
Journal of Computational Science 9, 131-136, 2015
Analysis of I/O performance on an Amazon EC2 cluster compute and high I/O platform
RR Expósito, GL Taboada, S Ramos, J González-Domínguez, J Touriño, ...
Journal of grid computing 11, 613-631, 2013
Parallel pairwise epistasis detection on heterogeneous computing architectures
J González-Domínguez, S Ramos, J Touriño, B Schmidt
IEEE Transactions on Parallel and Distributed Systems 27 (8), 2329-2340, 2015
UPC++ for bioinformatics: A case study using genome-wide association studies
JC Kässens, J González-Domínguez, L Wienbrandt, B Schmidt
2014 IEEE International Conference on Cluster Computing (CLUSTER), 248-256, 2014
Automatic mapping of parallel applications on multicore architectures using the Servet benchmark suite
J González-Domínguez, GL Taboada, BB Fraguela, MJ Martín, J Tourino
Computers & Electrical Engineering 38 (2), 258-269, 2012
Fast search of third-order epistatic interactions on CPU and GPU clusters
C Ponte-Fernández, J González-Domínguez, MJ Martín
The International Journal of High Performance Computing Applications 34 (1 …, 2020
Parallel and scalable short-read alignment on multi-core clusters using UPC++
J Gonzalez-Dominguez, Y Liu, B Schmidt
PloS one 11 (1), e0145490, 2016
Hybrid CPU/GPU acceleration of detection of 2-SNP epistatic interactions in GWAS
J González-Domínguez, B Schmidt, JC Kässens, L Wienbrandt
Euro-Par 2014 Parallel Processing: 20th International Conference, Porto …, 2014
Parallel feature selection for distributed-memory clusters
J González-Domínguez, V Bolón-Canedo, B Freire, J Touriño
Information Sciences 496, 399-409, 2019
MarDRe: efficient MapReduce-based removal of duplicate DNA reads in the cloud
RR Expósito, J Veiga, J González-Domínguez, J Touriño
Bioinformatics 33 (17), 2762-2764, 2017
HSRA: Hadoop-based spliced read aligner for RNA sequencing data
RR Expósito, J González-Domínguez, J Tourino
PLoS One 13 (7), e0201483, 2018
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