Martin Eisenacher
Martin Eisenacher
Medizinische Bioinformatik, Medizinisches Proteom-Center, Ruhr-University Bochum
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Cited by
Cited by
The PRIDE database and related tools and resources in 2019: improving support for quantification data
Y Perez-Riverol, A Csordas, J Bai, M Bernal-Llinares, S Hewapathirana, ...
Nucleic acids research 47 (D1), D442-D450, 2019
The PRIDE database resources in 2022: a hub for mass spectrometry-based proteomics evidences
Y Perez-Riverol, J Bai, C Bandla, D García-Seisdedos, S Hewapathirana, ...
Nucleic acids research 50 (D1), D543-D552, 2022
ProteomeXchange provides globally coordinated proteomics data submission and dissemination
JA Vizcaíno, EW Deutsch, R Wang, A Csordas, F Reisinger, D Ríos, ...
Nature biotechnology 32 (3), 223-226, 2014
Glucocorticoids induce differentiation of a specifically activated, anti-inflammatory subtype of human monocytes
J Ehrchen, L Steinmüller, K Barczyk, K Tenbrock, W Nacken, ...
Blood 109 (3), 1265-1274, 2007
A HUPO test sample study reveals common problems in mass spectrometry–based proteomics
AW Bell, EW Deutsch, CE Au, RE Kearney, R Beavis, S Sechi, T Nilsson, ...
Nature methods 6 (6), 423-430, 2009
Cytogenetic alterations and cytokeratin expression patterns in breast cancer: integrating a new model of breast differentiation into cytogenetic pathways of breast carcinogenesis
E Korsching, J Packeisen, K Agelopoulos, M Eisenacher, R Voss, J Isola, ...
Laboratory investigation 82 (11), 1525-1533, 2002
Proteomics characterization of mouse kidney peroxisomes by tandem mass spectrometry and protein correlation profiling
S Wiese, T Gronemeyer, R Ofman, M Kunze, CP Grou, JA Almeida, ...
Molecular & cellular proteomics 6 (12), 2045-2057, 2007
The mzIdentML data standard for mass spectrometry-based proteomics results
AR Jones, M Eisenacher, G Mayer, O Kohlbacher, J Siepen, SJ Hubbard, ...
Molecular & Cellular Proteomics 11 (7), M111. 014381-1-M111. 014381-10, 2012
PRIDE inspector toolsuite: moving toward a universal visualization tool for proteomics data standard formats and quality assessment of ProteomeXchange datasets
Y Perez-Riverol, QW Xu, R Wang, J Uszkoreit, J Griss, A Sanchez, ...
Molecular & Cellular Proteomics 15 (1), 305-317, 2016
Comparison of label-free and label-based strategies for proteome analysis of hepatoma cell lines
DA Megger, LL Pott, M Ahrens, J Padden, T Bracht, K Kuhlmann, ...
Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1844 (5), 967-976, 2014
Stable interference of EWS–FLI1 in an Ewing sarcoma cell line impairs IGF-1/IGF-1R signalling and reveals TOPK as a new target
D Herrero-Martin, D Osuna, JL Ordonez, V Sevillano, AS Martins, ...
British journal of cancer 101 (1), 80-90, 2009
Lipidomic and proteomic characterization of platelet extracellular vesicle subfractions from senescent platelets
A Pienimaeki‐Roemer, K Kuhlmann, A Böttcher, T Konovalova, A Black, ...
Transfusion 55 (3), 507-521, 2015
Microarray analysis of Ewing’s sarcoma family of tumours reveals characteristic gene expression signatures associated with metastasis and resistance to chemotherapy
KL Schaefer, M Eisenacher, Y Braun, K Brachwitz, DH Wai, U Dirksen, ...
European journal of cancer 44 (5), 699-709, 2008
Proteomic differences between hepatocellular carcinoma and nontumorous liver tissue investigated by a combined gel-based and label-free quantitative proteomics study
DA Megger, T Bracht, M Kohl, M Ahrens, W Naboulsi, F Weber, ...
Molecular & Cellular Proteomics 12 (7), 2006-2020, 2013
The proteome of human liver peroxisomes: identification of five new peroxisomal constituents by a label-free quantitative proteomics survey
T Gronemeyer, S Wiese, R Ofman, C Bunse, M Pawlas, H Hayen, ...
PloS one 8 (2), e57395, 2013
Reproducibility, specificity and accuracy of relative quantification using spectral library-based data-independent acquisition
K Barkovits, S Pacharra, K Pfeiffer, S Steinbach, M Eisenacher, K Marcus, ...
Molecular & Cellular Proteomics 19 (1), 181-197, 2020
Study of early leaf senescence in Arabidopsis thaliana by quantitative proteomics using reciprocal 14N/15N labeling and difference gel electrophoresis
R Hebeler, S Oeljeklaus, KA Reidegeld, M Eisenacher, C Stephan, ...
Molecular & Cellular Proteomics 7 (1), 108-120, 2008
Reporter metabolite analysis of transcriptional profiles of a Staphylococcus aureus strain with normal phenotype and its isogenic hemB mutant displaying the small-colony …
J Seggewiß, K Becker, O Kotte, M Eisenacher, MRK Yazdi, A Fischer, ...
Journal of bacteriology 188 (22), 7765-7777, 2006
The HUPO proteomics standards initiative-mass spectrometry controlled vocabulary
G Mayer, L Montecchi-Palazzi, D Ovelleiro, AR Jones, PA Binz, ...
Database 2013, bat009, 2013
Expression profiling of t (12; 22) positive clear cell sarcoma of soft tissue cell lines reveals characteristic up-regulation of potential new marker genes including ERBB3
KL Schaefer, K Brachwitz, DH Wai, Y Braun, R Diallo, E Korsching, ...
Cancer Research 64 (10), 3395-3405, 2004
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