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Shujun He
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Year
Artificial intelligence for diagnosis and Gleason grading of prostate cancer: the PANDA challenge
W Bulten, K Kartasalo, PHC Chen, P Ström, H Pinckaers, K Nagpal, Y Cai, ...
Nature medicine 28 (1), 154-163, 2022
2672022
Montmorillonites can tightly bind glyphosate and paraquat reducing toxin exposures and toxicity
M Wang, AA Orr, S He, C Dalaijamts, WA Chiu, P Tamamis, TD Phillips
ACS omega 4 (18), 17702-17713, 2019
372019
Deep learning models for predicting RNA degradation via dual crowdsourcing
HK Wayment-Steele, W Kladwang, AM Watkins, DS Kim, B Tunguz, ...
Nature Machine Intelligence 4 (12), 1174-1184, 2022
182022
Insights into the interactions of bisphenol and phthalate compounds with unamended and carnitine-amended montmorillonite clays
AA Orr, S He, M Wang, A Goodall, SE Hearon, TD Phillips, P Tamamis
Computers & chemical engineering 143, 107063, 2020
152020
RNAdegformer: accurate prediction of mRNA degradation at nucleotide resolution with deep learning
S He, B Gao, R Sabnis, Q Sun
Briefings in Bioinformatics 24 (1), bbac581, 2023
82023
Eterna Participants and R
HK Wayment-Steele, W Kladwang, AM Watkins, DS Kim, B Tunguz, ...
Das, Nat. Mach. Intell 4, 1174-1184, 2022
62022
Nucleic Transformer: Deep Learning on Nucleic Acids with Self-Attention and Convolutions
S He, B Gao, R Sabnis, Q Sun
bioRxiv, 2021.01. 28.428629, 2021
52021
Predictive models of RNA degradation through dual crowdsourcing
HK Wayment-Steele, W Kladwang, AM Watkins, DS Kim, B Tunguz, ...
12021
Mesoscopic models for electrohydrodynamic interactions of polyelectrolytes
DI Kopelevich, S He, RJ Montes, JE Butler
Journal of Fluid Mechanics 915, A59, 2021
12021
Systems and methods for evaluation of structure and property of polynucleotides
SUN Qing, S He
US Patent App. 18/273,293, 2024
2024
Ribonanza: deep learning of RNA structure through dual crowdsourcing
S He, R Huang, J Townley, RC Kretsch, TG Karagianes, DBT Cox, H Blair, ...
bioRxiv, 2024.02. 24.581671, 2024
2024
Nucleic Transformer: Classifying DNA Sequences with Self-Attention and Convolutions
S He, B Gao, R Sabnis, Q Sun
ACS Synthetic Biology 12 (11), 3205-3214, 2023
2023
Deep learning models for predicting RNA degradation via dual crowdsourcing (preprint)
HK Wayment-Steele, W Kladwang, AM Watkins, B Tunguz, W Reade, ...
2021
Nucleic Transformer: Deep Learning on Nucleic Acids with Self-attention and Convolutions (preprint)
S He, B Gao, R Sabnis, Q Sun
2021
Molecular Modeling and Simulations Uncovering the Sorption of Toxic Compounds on Unamended and Carnitine-Amended Montmorillonite Clays
A Orr, M Wang, S He, JM Jakubowski, SE Hearon, TD Phillips, P Tamamis
2020 Virtual AIChE Annual Meeting, 2020
2020
Computational Modeling and Simulation Studies on the Binding of Toxic Compounds to Montmorillonite Clay
S He, A Orr, M Wang, SE Hearon, TD Phillips, P Tamamis
2019 AIChE Annual Meeting, 2019
2019
Mesoscopic Models for Electro-Hydrodynamic Interactions of Polyelectrolytes
S He, RJ Montes, J Butler, D Kopelevich
2019 AIChE Annual Meeting, 2019
2019
Data-Driven Design of Functional Amyloid Biomaterials
SVR Jonnalagadda, S He, JM Jakubowski, A Orr, XL Lim, C Kokotidou, ...
2019 AIChE Annual Meeting, 2019
2019
Migration of DNA Due to a Combination of Parallel Pressure Gradient and External Electric Field
S He, RJ Montes, D Kopelevich, J Butler
2017 AIChE Annual Meeting, 2017
2017
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Articles 1–19