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Shanshan Gao
Shanshan Gao
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Title
Cited by
Cited by
Year
How genome complexity can explain the difficulty of aligning reads to genomes
V Phan, S Gao, Q Tran, NS Vo
BMC bioinformatics 16 (17), S3, 2015
112015
Analysis of optimal alignments unfolds aligners’ bias in existing variant profiles
Q Tran, S Gao, V Phan
BMC bioinformatics 17 (13), 349, 2016
82016
How genome complexity can explain the hardness of aligning reads to genomes
V Phan, S Gao, Q Tran, NS Vo
2014 IEEE 4th International Conference on Computational Advances in Bio and …, 2014
72014
An accurate and fast alignment-free method for profiling microbial communities
DT Pham, S Gao, V Phan
Journal of bioinformatics and computational biology 15 (03), 1740001, 2017
52017
Understand Effective Coverage by Mapped Reads using Genome Repeat Complexity
S Gao, Q Tran, V Phan
Proceedings of 11th International Conference 60, 65-73, 2019
32019
Repeat complexity of genomes as a means to predict the performance of short-read aligners
Q Tran, S Gao, NS Vo, V Phan
Proceedings of the 8th International Conference on Bioinformatics and …, 2016
32016
A linear model for predicting performance of short-read aligners using genome complexity
Q Tran, S Gao, NS Vo, V Phan
BMC bioinformatics 16 (15), P17, 2015
32015
Alignment-free methods for metagenomic profiling
S Gao, DT Pham, V Phan
BMC bioinformatics 16 (S15), P4, 2015
22015
ICCABS 2014 Program
BW Sankoff, C Zheng, CFBA Najar, V Phan, S Gao, Q Tran, PHD Together, ...
Can audio features serve as marker of autism spectrum disorders? Bonny Banerjee1, Andrew Papanicolaou2, Shanshan Gao1, Frances A. Tylavsky3 1Institute for Intelligent Systems …
B Banerjee, A Papanicolaou, S Gao, FA Tylavsky
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