MicroRNA expression characterizes oligometastasis (es) YA Lussier, HR Xing, JK Salama, NN Khodarev, Y Huang, Q Zhang, ... PloS one 6 (12), e28650, 2011 | 311 | 2011 |
A common genetic variant within SCN10A modulates cardiac SCN5A expression M Van Den Boogaard, S Smemo, O Burnicka-Turek, DE Arnolds, ... The Journal of clinical investigation 124 (4), 1844-1852, 2014 | 220 | 2014 |
Up-regulation of a HOXA-PBX3 homeobox-gene signature following down-regulation of miR-181 is associated with adverse prognosis in patients with … Z Li, H Huang, Y Li, X Jiang, P Chen, S Arnovitz, MD Radmacher, ... Blood, The Journal of the American Society of Hematology 119 (10), 2314-2324, 2012 | 209 | 2012 |
Identification of a 24-gene prognostic signature that improves the European LeukemiaNet risk classification of acute myeloid leukemia: an international collaborative study Z Li, T Herold, C He, PJM Valk, P Chen, V Jurinovic, U Mansmann, ... Journal of clinical oncology 31 (9), 1172-1181, 2013 | 202 | 2013 |
Network modeling identifies molecular functions targeted by miR-204 to suppress head and neck tumor metastasis Y Lee, X Yang, Y Huang, H Fan, Q Zhang, Y Wu, J Li, R Hasina, C Cheng, ... PLoS computational biology 6 (4), e1000730, 2010 | 178 | 2010 |
Pitx2 modulates a Tbx5-dependent gene regulatory network to maintain atrial rhythm RD Nadadur, MT Broman, B Boukens, SR Mazurek, X Yang, ... Science translational medicine 8 (354), 354ra115-354ra115, 2016 | 165 | 2016 |
De Novo and Rare Variants at Multiple Loci Support the Oligogenic Origins of Atrioventricular Septal Heart Defects JR Priest, K Osoegawa, N Mohammed, V Nanda, R Kundu, K Schultz, ... PLoS genetics 12 (4), e1005963, 2016 | 114 | 2016 |
OrderedList—a bioconductor package for detecting similarity in ordered gene lists C Lottaz, X Yang, S Scheid, R Spang Bioinformatics 22 (18), 2315-2316, 2006 | 92 | 2006 |
Foxf Genes Integrate Tbx5 and Hedgehog Pathways in the Second Heart Field for Cardiac Septation AD Hoffmann, XH Yang, O Burnicka-Turek, JD Bosman, X Ren, ... PLoS genetics 10 (10), e1004604, 2014 | 89 | 2014 |
Single sample expression-anchored mechanisms predict survival in head and neck cancer X Yang, K Regan, Y Huang, Q Zhang, J Li, TY Seiwert, EEW Cohen, ... PLoS computational biology 8 (1), e1002350, 2012 | 82 | 2012 |
Similarities of ordered gene lists X Yang, S Bentink, S Scheid, R Spang Journal of bioinformatics and computational biology 4 (03), 693-708, 2006 | 79 | 2006 |
Evolutionarily conserved Tbx5–Wnt2/2b pathway orchestrates cardiopulmonary development JD Steimle, SA Rankin, CE Slagle, J Bekeny, AB Rydeen, SSK Chan, ... Proceedings of the National Academy of Sciences 115 (45), E10615-E10624, 2018 | 60 | 2018 |
Cilia gene mutations cause atrioventricular septal defects by multiple mechanisms O Burnicka-Turek, JD Steimle, W Huang, L Felker, A Kamp, J Kweon, ... Human molecular genetics 25 (14), 3011-3028, 2016 | 60 | 2016 |
Bridging Cancer Biology with the Clinic: Relative Expression of a GRHL2-Mediated Gene-Set Pair Predicts Breast Cancer Metastasis X Yang, P Vasudevan, V Parekh, A Penev, JM Cunningham PloS one 8 (2), e56195, 2013 | 59 | 2013 |
Network models of genome-wide association studies uncover the topological centrality of protein interactions in complex diseases Y Lee, H Li, J Li, E Rebman, I Achour, KE Regan, ER Gamazon, JL Chen, ... Journal of the American Medical Informatics Association 20 (4), 619-629, 2013 | 56 | 2013 |
Transcription-factor-dependent enhancer transcription defines a gene regulatory network for cardiac rhythm XH Yang, RD Nadadur, CRE Hilvering, V Bianchi, M Werner, SR Mazurek, ... Elife 6, e31683, 2017 | 44 | 2017 |
GO-Module: functional synthesis and improved interpretation of Gene Ontology patterns X Yang, J Li, Y Lee, YA Lussier Bioinformatics 27 (10), 1444-1446, 2011 | 42 | 2011 |
Kinase inhibition-related adverse events predicted from in vitro kinome and clinical trial data X Yang, Y Huang, M Crowson, J Li, ML Maitland, YA Lussier Journal of biomedical informatics 43 (3), 376-384, 2010 | 39 | 2010 |
Meta-analysis of several gene lists for distinct types of cancer: a simple way to reveal common prognostic markers X Yang, X Sun BMC bioinformatics 8, 1-17, 2007 | 33 | 2007 |
A c-Myc-regulated stem cell-like signature in high-risk neuroblastoma: A systematic discovery (Target neuroblastoma ESC-like signature) X Yang, F Tang, J Shin, JM Cunningham Scientific reports 7 (1), 41, 2017 | 32 | 2017 |