| Visualization and analysis of gene expression in tissue sections by spatial transcriptomics PL Ståhl, F Salmén, S Vickovic, A Lundmark, JF Navarro, J Magnusson, ... Science 353 (6294), 78-82, 2016 | 2606 | 2016 |
| Small-world communication of residues and significance for protein dynamics AR Atilgan, P Akan, C Baysal Biophysical journal 86 (1), 85-91, 2004 | 387 | 2004 |
| Integrated Genetic and Epigenetic Analysis Identifies Haplotype-Specific Methylation in the FTO Type 2 Diabetes and Obesity Susceptibility Locus CG Bell, S Finer, CM Lindgren, GA Wilson, VK Rakyan, AE Teschendorff, ... PloS one 5 (11), e14040, 2010 | 342 | 2010 |
| Genome-wide mapping of promoter-anchored interactions with close to single-enhancer resolution P Sahlén, I Abdullayev, D Ramsköld, L Matskova, N Rilakovic, B Lötstedt, ... Genome biology 16, 1-13, 2015 | 150 | 2015 |
| DNA sequence and structural properties as predictors of human and mouse promoters P Akan, P Deloukas Gene 410 (1), 165-176, 2008 | 57 | 2008 |
| TagGD: fast and accurate software for DNA Tag generation and demultiplexing PI Costea, J Lundeberg, P Akan PLoS One 8 (3), e57521, 2013 | 52 | 2013 |
| Comprehensive analysis of the genome transcriptome and proteome landscapes of three tumor cell lines P Akan, A Alexeyenko, PI Costea, L Hedberg, BW Solnestam, S Lundin, ... Genome medicine 4, 1-13, 2012 | 51 | 2012 |
| Multiplex PCB-based electrochemical detection of cancer biomarkers using MLPA-barcode approach JLA Sánchez, OYF Henry, H Joda, BW Solnestam, L Kvastad, ... Biosensors and Bioelectronics 82, 224-232, 2016 | 46 | 2016 |
| Comparison of total and cytoplasmic mRNA reveals global regulation by nuclear retention and miRNAs BW Solnestam, H Stranneheim, J Hällman, M Käller, E Lundberg, ... BMC genomics 13, 1-9, 2012 | 46 | 2012 |
| SNP allele frequency estimation in DNA pools and variance components analysis K Downes, BJ Barratt, P Akan, SJ Bumpstead, SD Taylor, DG Clayton, ... Biotechniques 36 (5), 840-845, 2004 | 43 | 2004 |
| Current challenges in understanding the role of enhancers in disease JB Zaugg, P Sahlén, R Andersson, M Alberich-Jorda, W de Laat, ... Nature structural & molecular biology 29 (12), 1148-1158, 2022 | 42 | 2022 |
| The BAF and PRC2 complex subunits Dpf2 and Eed antagonistically converge on Tbx3 to control ESC differentiation W Zhang, C Chronis, X Chen, H Zhang, R Spalinskas, M Pardo, L Chen, ... Cell Stem Cell 24 (1), 138-152. e8, 2019 | 41 | 2019 |
| Linkage disequilibrium mapping of the replicated type 2 diabetes linkage signal on chromosome 1q I Prokopenko, E Zeggini, RL Hanson, BD Mitchell, NW Rayner, P Akan, ... Diabetes 58 (7), 1704-1709, 2009 | 34 | 2009 |
| A multi-omics approach to liver diseases: integration of single nuclei transcriptomics with proteomics and HiCap bulk data in human liver M Cavalli, K Diamanti, G Pan, R Spalinskas, C Kumar, AS Deshmukh, ... Omics: a journal of integrative biology 24 (4), 180-194, 2020 | 31 | 2020 |
| Allele specific chromatin signals, 3D interactions, and motif predictions for immune and B cell related diseases M Cavalli, N Baltzer, HM Umer, J Grau, I Lemnian, G Pan, O Wallerman, ... Scientific reports 9 (1), 2695, 2019 | 28 | 2019 |
| Interpretation, stratification and evidence for sequence variants affecting mRNA splicing in complete human genome sequences BC Shirley, EJ Mucaki, T Whitehead, PI Costea, P Akan, PK Rogan Genomics, Proteomics and Bioinformatics 11 (2), 77-85, 2013 | 28 | 2013 |
| HiCapTools: a software suite for probe design and proximity detection for targeted chromosome conformation capture applications A Anil, R Spalinskas, Ö Åkerborg, P Sahlen Bioinformatics 34 (4), 675-677, 2018 | 25 | 2018 |
| Single cell analysis of cancer cells using an improved RT-MLPA method has potential for cancer diagnosis and monitoring L Kvastad, B Werne Solnestam, E Johansson, AO Nygren, N Laddach, ... Scientific Reports 5 (1), 16519, 2015 | 23 | 2015 |
| Chromatin interactions in differentiating keratinocytes reveal novel atopic dermatitis–and psoriasis-associated genes P Sahlén, R Spalinskas, S Asad, KD Mahapatra, P Höjer, A Anil, J Eisfeldt, ... Journal of Allergy and Clinical Immunology 147 (5), 1742-1752, 2021 | 22 | 2021 |
| Electrochemical genetic profiling of single cancer cells JL Acero Sanchez, H Joda, OYF Henry, BW Solnestam, L Kvastad, ... Analytical chemistry 89 (6), 3378-3385, 2017 | 18 | 2017 |
Joakim LundebergSciLifeLab, KTH Royal Institute of TechnologyVerified email at scilifelab.se
