| OntoGene web services for biomedical text mining F Rinaldi, S Clematide, H Marques, T Ellendorff, M Romacker, ... BMC bioinformatics 15, 1-10, 2014 | 32 | 2014 |
| BioCreative V track 4: a shared task for the extraction of causal network information using the Biological Expression Language F Rinaldi, TR Ellendorff, S Madan, S Clematide, A Van der Lek, ... Database 2016, baw067, 2016 | 31 | 2016 |
| Assisted curation of regulatory interactions and growth conditions of OxyR in E. coli K-12 S Gama-Castro, F Rinaldi, A Lopez-Fuentes, YI Balderas-Martínez, ... Database 2014, bau049, 2014 | 23 | 2014 |
| Track 4 overview: extraction of causal network information in biological expression language (BEL) J Fluck, S Madan, TR Ellendorff, T Mevissen, S Clematide, A van der Lek, ... Proceedings of the fifth BioCreative challenge evaluation workshop, 333-346, 2015 | 18 | 2015 |
| COVID-19 Twitter monitor: Aggregating and visualizing COVID-19 related trends in social media J Cornelius, T Ellendorff, L Furrer, F Rinaldi Proceedings of the Fifth Social Media Mining for Health Applications …, 2020 | 10 | 2020 |
| Approaching SMM4H with merged models and multi-task learning T Ellendorff, L Furrer, N Colic, N Aepli, F Rinaldi Proceedings of the Fourth Social Media Mining for Health Applications …, 2019 | 8 | 2019 |
| ODIN: a customizable literature curation tool F Rinaldi, AP Davis, C Southan, S Clematide, TR Ellendorff, G Schneider Biocreative 1, 219-223, 2013 | 8 | 2013 |
| Using a hybrid approach for entity recognition in the biomedical domain M Basaldella, L Furrer, N Colic, TR Ellendorff, C Tasso, F Rinaldi, ... University of Zurich, 2016 | 7 | 2016 |
| The PsyMine Corpus-a corpus annotated with psychiatric disorders and their etiological factors T Ellendorff, S Foster, F Rinaldi Proceedings of the Tenth International Conference on Language Resources and …, 2016 | 7 | 2016 |
| A combined resource of biomedical terminology and its statistics TR Ellendorff, A Van der Lek, L Furrer, F Rinaldi, T Poibeau, P Faber University of Zurich, 2015 | 6 | 2015 |
| OntoGene: CTD entity and action term recognition F Rinaldi, S Clematide, TR Ellendorff, H Marques Biocreative 1, 90-94, 2013 | 6 | 2013 |
| Using large biomedical databases as gold annotations for automatic relation extraction T Ellendorff, F Rinaldi, S Clematide, N Calzolari, K Choukri, T Declerck, ... European Language Resources Association (ELRA), 2014 | 5 | 2014 |
| Ontogene term and relation recognition for CDR TR Ellendorff, S Clematide, A van der Lek, L Furrer, F Rinaldi University of Zurich, 2015 | 4 | 2015 |
| UZH@ SMM4H: System Descriptions T Ellendorff, J Cornelius, H Gordon, N Colic, F Rinaldi Proceedings of the 2018 EMNLP Workshop SMM4H: The 3rd Social Media Mining …, 2018 | 3 | 2018 |
| Approaching SMM4H with auto-regressive language models and back-translation J Cornelius, T Ellendorff, F Rinaldi Proceedings of the Sixth Social Media Mining for Health (# SMM4H) Workshop …, 2021 | 1 | 2021 |
| Large Language Models to process, analyze, and synthesize biomedical texts-a scoping review SE Doneva, S Qin, B Sick, T Ellendorff, JP Goldman, G Schneider, ... bioRxiv, 2024.04. 19.588095, 2024 | | 2024 |
| Biomedical Text Mining for Etiological Factor Identification in Mental Health Publications T Ellendorff University of Zurich, 2021 | | 2021 |
| Relation Extraction for People Search on the Web T Ellendorff | | 2012 |
| Statistics and Characteristics of Multi-word Entities in the Biomedical Domain across Entity Types TR Ellendorff, F Rinaldi | | |
