Charles Chiu
Charles Chiu
Professor of Laboratory Medicine and Medicine / Infectious Diseases, University of California, San
Verified email at - Homepage
Cited by
Cited by
CRISPR–Cas12-based detection of SARS-CoV-2
JP Broughton, X Deng, G Yu, CL Fasching, V Servellita, J Singh, X Miao, ...
Nature biotechnology 38 (7), 870-874, 2020
Clinical metagenomics
CY Chiu, SA Miller
Nature Reviews Genetics 20 (6), 341-355, 2019
Clinical metagenomic next-generation sequencing for pathogen detection
W Gu, S Miller, CY Chiu
Annual Review of Pathology: Mechanisms of Disease 14, 319-338, 2019
Actionable diagnosis of neuroleptospirosis by next-generation sequencing
MR Wilson, SN Naccache, E Samayoa, M Biagtan, H Bashir, G Yu, ...
New England Journal of Medicine 370 (25), 2408-2417, 2014
Clinical metagenomic sequencing for diagnosis of meningitis and encephalitis
MR Wilson, HA Sample, KC Zorn, S Arevalo, G Yu, J Neuhaus, ...
New England Journal of Medicine 380 (24), 2327-2340, 2019
Establishment and cryptic transmission of Zika virus in Brazil and the Americas
NR Faria, J Quick, IM Claro, J Theze, JG de Jesus, M Giovanetti, ...
Nature 546 (7658), 406-410, 2017
Rapid metagenomic identification of viral pathogens in clinical samples by real-time nanopore sequencing analysis
AL Greninger, SN Naccache, S Federman, G Yu, P Mbala, V Bres, ...
Genome medicine 7, 1-13, 2015
A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples
SN Naccache, S Federman, N Veeraraghavan, M Zaharia, D Lee, ...
Genome research 24 (7), 1180-1192, 2014
Transmission, infectivity, and neutralization of a spike L452R SARS-CoV-2 variant
X Deng, MA Garcia-Knight, MM Khalid, V Servellita, C Wang, MK Morris, ...
Cell 184 (13), 3426-3437. e8, 2021
A novel outbreak enterovirus D68 strain associated with acute flaccid myelitis cases in the USA (2012–14): a retrospective cohort study
AL Greninger, SN Naccache, K Messacar, A Clayton, G Yu, S Somasekar, ...
The Lancet Infectious Diseases 15 (6), 671-682, 2015
Validation of metagenomic next-generation sequencing tests for universal pathogen detection
R Schlaberg, CY Chiu, S Miller, GW Procop, G Weinstock, ...
Archives of Pathology and Laboratory Medicine 141 (6), 776-786, 2017
Recovery of divergent avian bornaviruses from cases of proventricular dilatation disease: identification of a candidate etiologic agent
AL Kistler, A Gancz, S Clubb, P Skewes-Cox, K Fischer, K Sorber, ...
Virology journal 5 (1), 1-15, 2008
Nanopore DNA sequencing and genome assembly on the International Space Station
SL Castro-Wallace, CY Chiu, KK John, SE Stahl, KH Rubins, ...
Scientific reports 7 (1), 18022, 2017
Emergence and rapid transmission of SARS-CoV-2 B. 1.1. 7 in the United States
NL Washington, K Gangavarapu, M Zeller, A Bolze, ET Cirulli, ...
Cell 184 (10), 2587-2594. e7, 2021
Rapid pathogen detection by metagenomic next-generation sequencing of infected body fluids
W Gu, X Deng, M Lee, YD Sucu, S Arevalo, D Stryke, S Federman, ...
Nature medicine 27 (1), 115-124, 2021
Laboratory validation of a clinical metagenomic sequencing assay for pathogen detection in cerebrospinal fluid
S Miller, SN Naccache, E Samayoa, K Messacar, S Arevalo, S Federman, ...
Genome research 29 (5), 831-842, 2019
Diagnosis of neuroinvasive astrovirus infection in an immunocompromised adult with encephalitis by unbiased next-generation sequencing
SN Naccache, KS Peggs, FM Mattes, R Phadke, JA Garson, P Grant, ...
Clinical Infectious Diseases 60 (6), 919-923, 2015
Viral infection in acute exacerbation of idiopathic pulmonary fibrosis
SC Wootton, DS Kim, Y Kondoh, E Chen, JS Lee, JW Song, JW Huh, ...
American journal of respiratory and critical care medicine 183 (12), 1698-1702, 2011
Cryptic transmission of SARS-CoV-2 in Washington state
T Bedford, AL Greninger, P Roychoudhury, LM Starita, M Famulare, ...
Science 370 (6516), 571-575, 2020
Integrating host response and unbiased microbe detection for lower respiratory tract infection diagnosis in critically ill adults
C Langelier, KL Kalantar, F Moazed, MR Wilson, ED Crawford, T Deiss, ...
Proceedings of the National Academy of Sciences 115 (52), E12353-E12362, 2018
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