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Yiliang Ding
Yiliang Ding
Group Leader, Department of Cell and Developmental Biology, John Innes Centre, UK
Verified email at jic.ac.uk - Homepage
Title
Cited by
Cited by
Year
In vivo genome-wide profiling of RNA secondary structure reveals novel regulatory features
Y Ding, Y Tang, CK Kwok, Y Zhang, PC Bevilacqua, SM Assmann
Nature 505 (7485), 696-700, 2014
8442014
Abscisic Acid Coordinates Nod Factor and Cytokinin Signaling during the Regulation of Nodulation in Medicago truncatula
Y Ding, P Kalo, C Yendrek, J Sun, Y Liang, JF Marsh, JM Harris, ...
The Plant Cell 20 (10), 2681-2695, 2008
2472008
The NIN Transcription Factor Coordinates Diverse Nodulation Programs in Different Tissues of the Medicago truncatula Root
T Vernié, J Kim, L Frances, Y Ding, J Sun, D Guan, A Niebel, ML Gifford, ...
The Plant Cell 27 (12), 3410-3424, 2015
2012015
Determination of in vivo RNA structure in low-abundance transcripts
CK Kwok, Y Ding, Y Tang, SM Assmann, PC Bevilacqua
Nature communications 4 (1), 2971, 2013
1372013
G-quadruplex structures trigger RNA phase separation
Y Zhang, M Yang, S Duncan, X Yang, MAS Abdelhamid, L Huang, ...
Nucleic acids research 47 (22), 11746-11754, 2019
1312019
Positioning the nodule, the hormone dictum
Y Ding, GED Oldroyd
Plant Signaling & Behavior 4 (2), 89-93, 2009
1252009
RNA G-quadruplex structures exist and function in vivo in plants
X Yang, J Cheema, Y Zhang, H Deng, S Duncan, MI Umar, J Zhao, Q Liu, ...
Genome biology 21, 1-23, 2020
1022020
Genome-wide profiling of in vivo RNA structure at single-nucleotide resolution using structure-seq
Y Ding, CK Kwok, Y Tang, PC Bevilacqua, SM Assmann
Nature protocols 10 (7), 1050-1066, 2015
1012015
A stable RNA G-quadruplex within the 5′-UTR of Arabidopsis thaliana ATR mRNA inhibits translation
CK Kwok, Y Ding, S Shahid, SM Assmann, PC Bevilacqua
Biochemical Journal 467 (1), 91-102, 2015
812015
In vivo single-molecule analysis reveals COOLAIR RNA structural diversity
M Yang, P Zhu, J Cheema, R Bloomer, P Mikulski, Q Liu, Y Zhang, ...
Nature 609 (7926), 394-399, 2022
762022
VERNALIZATION1 controls developmental responses of winter wheat under high ambient temperatures
LE Dixon, I Karsai, T Kiss, NM Adamski, Z Liu, Y Ding, V Allard, SA Boden, ...
Development 146 (3), dev172684, 2019
752019
Rice in vivo RNA structurome reveals RNA secondary structure conservation and divergence in plants
H Deng, J Cheema, H Zhang, H Woolfenden, M Norris, Z Liu, Q Liu, ...
Molecular plant 11 (4), 607-622, 2018
612018
StructureFold: genome-wide RNA secondary structure mapping and reconstruction in vivo
Y Tang, E Bouvier, CK Kwok, Y Ding, A Nekrutenko, PC Bevilacqua, ...
Bioinformatics 31 (16), 2668-2675, 2015
562015
A hybridization-based approach for quantitative and low-bias single-stranded DNA ligation
CK Kwok, Y Ding, ME Sherlock, SM Assmann, PC Bevilacqua
Analytical biochemistry 435 (2), 181-186, 2013
552013
Targeting the conserved stem loop 2 motif in the SARS-CoV-2 genome
V Lulla, MP Wandel, KJ Bandyra, R Ulferts, M Wu, T Dendooven, X Yang, ...
Journal of virology 95 (14), 10.1128/jvi. 00663-21, 2021
502021
Intact RNA structurome reveals mRNA structure-mediated regulation of miRNA cleavage in vivo
M Yang, HC Woolfenden, Y Zhang, X Fang, Q Liu, ML Vigh, J Cheema, ...
Nucleic acids research 48 (15), 8767-8781, 2020
422020
Structure of the three-way helical junction of the hepatitis C virus IRES element
J Ouellet, S Melcher, A Iqbal, Y Ding, DMJ Lilley
RNA 16 (8), 1597-1609, 2010
412010
Recent advances in RNA structurome
B Xu, Y Zhu, C Cao, H Chen, Q Jin, G Li, J Ma, SL Yang, J Zhao, J Zhu, ...
Science China Life Sciences 65 (7), 1285-1324, 2022
372022
RNA G-quadruplex structure contributes to cold adaptation in plants
X Yang, H Yu, S Duncan, Y Zhang, J Cheema, H Liu, J Benjamin Miller, ...
Nature communications 13 (1), 6224, 2022
352022
New era of studying RNA secondary structure and its influence on gene regulation in plants
X Yang, M Yang, H Deng, Y Ding
Frontiers in plant science 9, 671, 2018
352018
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Articles 1–20