| Local structural order and molecular associations in water-DMSO mixtures. Molecular dynamics study II Vaisman, ML Berkowitz Journal of the American Chemical Society 114 (20), 7889-7896, 1992 | 388 | 1992 |
| Delaunay tessellation of proteins: four body nearest-neighbor propensities of amino acid residues RK Singh, A Tropsha, II Vaisman Journal of Computational Biology 3 (2), 213-221, 1996 | 238 | 1996 |
| Accurate prediction of stability changes in protein mutants by combining machine learning with structure based computational mutagenesis M Masso, II Vaisman Bioinformatics 24 (18), 2002-2009, 2008 | 182 | 2008 |
| Discrimination of thermophilic and mesophilic proteins T Todd, V Iosif Taylor and Vaisman BMC Structural Biology 10, 2010 | 151* | 2010 |
| AUTO-MUTE: web-based tools for predicting stability changes in proteins due to single amino acid replacements M Masso, II Vaisman Protein Engineering, Design & Selection 23 (8), 683-687, 2010 | 116 | 2010 |
| Cell surface expression of CD147/EMMPRIN is regulated by cyclophilin 60 T Pushkarsky, V Yurchenko, C Vanpouille, B Brichacek, I Vaisman, ... Journal of Biological Chemistry 280 (30), 27866-27871, 2005 | 112 | 2005 |
| Chemistry of Non Aqueous Solutions: Current Progress YM Kessler, YP Puhovski, MG Kiselev, II Vaisman, G Mamantov, AI Popov Chemistry of Non Aqueous Solutions: Current Progress, 1994 | 112* | 1994 |
| Distance dependence of water structure around model solutes II Vaisman, FK Brown, A Tropsha The Journal of Physical Chemistry 98 (21), 5559-5564, 1994 | 77 | 1994 |
| Machine learning approach for structure-based zeolite classification DA Carr, M Lach-hab, S Yang, II Vaisman, E Blaisten-Barojas Microporous and Mesoporous Materials 117 (1-2), 339-349, 2009 | 74 | 2009 |
| AUTO‐MUTE 2.0: A portable framework with enhanced capabilities for predicting protein functional consequences upon mutation M Masso, II Vaisman Advances in bioinformatics 2014 (1), 278385, 2014 | 68 | 2014 |
| Accurate prediction of enzyme mutant activity based on a multibody statistical potential M Masso, II Vaisman Bioinformatics 23 (23), 3155-3161, 2007 | 63 | 2007 |
| Knowledge-based computational mutagenesis for predicting the disease potential of human non-synonymous single nucleotide polymorphisms M Masso, II Vaisman Journal of Theoretical Biology 266 (4), 560-568, 2010 | 61 | 2010 |
| Simplicial neighborhood analysis of protein packing (SNAPP): a computational geometry approach to studying proteins A Tropsha, CW Carter Jr, S Cammer, II Vaisman Methods in enzymology 374, 509-544, 2003 | 60 | 2003 |
| Machine learning prediction of antimicrobial peptides G Wang, II Vaisman, ML van Hoek Computational peptide science: Methods and protocols, 1-37, 2022 | 57 | 2022 |
| Compositional preferences in quadruplets of nearest neighbor residues in protein structures: statistical geometry analysis II Vaisman, A Tropsha, W Zheng Proceedings. IEEE International Joint Symposia on Intelligence and Systems …, 1998 | 54 | 1998 |
| A simple topological representation of protein structure: implications for new, fast, and robust structural classification DL Bostick, M Shen, II Vaisman Proteins: Structure, Function, and Bioinformatics 56 (3), 487-501, 2004 | 53 | 2004 |
| A new topological method to measure protein structure similarity D Bostick, II Vaisman Biochemical and Biophysical Research Communications 304 (2), 320-325, 2003 | 51 | 2003 |
| A new approach to protein fold recognition based on Delaunay tessellation of protein structure. W Zheng, SJ Cho, II Vaisman, A Tropsha Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing, 486-497, 1997 | 48 | 1997 |
| Statistical geometry based prediction of nonsynonymous SNP functional effects using random forest and neuro‐fuzzy classifiers M Barenboim, M Masso, II Vaisman, DC Jamison Proteins: Structure, Function, and Bioinformatics 71 (4), 1930-1939, 2008 | 45 | 2008 |
| Statistical geometry analysis of proteins: implications for inverted structure prediction. A Tropsha, RK Singh, II Vaisman, W Zheng Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing, 614-623, 1996 | 45 | 1996 |
Lalith PereraStaff Scientist, National Institute of Environmental Health SciencesVerified email at niehs.nih.gov
