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Eric Deutsch
Eric Deutsch
Verified email at systemsbiology.org
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Cited by
Cited by
Year
Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1
DJ Klionsky, AK Abdel-Aziz, S Abdelfatah, M Abdellatif, A Abdoli, S Abel, ...
autophagy 17 (1), 1-382, 2021
13100*2021
A cross-platform toolkit for mass spectrometry and proteomics
MC Chambers, B Maclean, R Burke, D Amodei, DL Ruderman, ...
Nature biotechnology 30 (10), 918-920, 2012
31322012
ProteomeXchange provides globally coordinated proteomics data submission and dissemination
JA Vizcaíno, EW Deutsch, R Wang, A Csordas, F Reisinger, D Ríos, ...
Nature biotechnology 32 (3), 223-226, 2014
26672014
A common open representation of mass spectrometry data and its application to proteomics research
PGA Pedrioli, JK Eng, R Hubley, M Vogelzang, EW Deutsch, B Raught, ...
Nature biotechnology 22 (11), 1459-1466, 2004
9582004
The peptideatlas project
F Desiere, EW Deutsch, NL King, AI Nesvizhskii, P Mallick, J Eng, S Chen, ...
Nucleic acids research 34 (suppl_1), D655-D658, 2006
9102006
The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition
EW Deutsch, A Csordas, Z Sun, A Jarnuczak, Y Perez-Riverol, T Ternent, ...
Nucleic acids research, gkw936, 2016
8542016
A guided tour of the Trans‐Proteomic Pipeline
EW Deutsch, L Mendoza, D Shteynberg, T Farrah, H Lam, N Tasman, ...
Proteomics 10 (6), 1150-1159, 2010
8472010
The minimum information about a proteomics experiment (MIAPE)
CF Taylor, NW Paton, KS Lilley, PA Binz, RK Julian Jr, AR Jones, W Zhu, ...
Nature biotechnology 25 (8), 887-893, 2007
8042007
mzML—a community standard for mass spectrometry data
L Martens, M Chambers, M Sturm, D Kessner, F Levander, J Shofstahl, ...
Molecular & Cellular Proteomics 10 (1), 2011
6792011
The ProteomeXchange consortium in 2020: enabling ‘big data’approaches in proteomics
EW Deutsch, N Bandeira, V Sharma, Y Perez-Riverol, JJ Carver, ...
Nucleic acids research 48 (D1), D1145-D1152, 2020
6442020
Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project
CF Taylor, D Field, SA Sansone, J Aerts, R Apweiler, M Ashburner, ...
Nature biotechnology 26 (8), 889-896, 2008
6172008
Development and validation of a spectral library searching method for peptide identification from MS/MS
H Lam, EW Deutsch, JS Eddes, JK Eng, N King, SE Stein, R Aebersold
Proteomics 7 (5), 655-667, 2007
6152007
PeptideAtlas: a resource for target selection for emerging targeted proteomics workflows
EW Deutsch, H Lam, R Aebersold
EMBO reports 9 (5), 429-434, 2008
6102008
Design and implementation of microarray gene expression markup language (MAGE-ML)
PT Spellman, M Miller, J Stewart, C Troup, U Sarkans, S Chervitz, ...
Genome biology 3, 1-9, 2002
5962002
iProphet: multi-level integrative analysis of shotgun proteomic data improves peptide and protein identification rates and error estimates
D Shteynberg, EW Deutsch, H Lam, JK Eng, Z Sun, N Tasman, ...
Molecular & cellular proteomics 10 (12), 2011
5932011
Targeted peptide measurements in biology and medicine: best practices for mass spectrometry-based assay development using a fit-for-purpose approach
SA Carr, SE Abbatiello, BL Ackermann, C Borchers, B Domon, ...
Molecular & Cellular Proteomics 13 (3), 907-917, 2014
5552014
A high-confidence human plasma proteome reference set with estimated concentrations in PeptideAtlas
T Farrah, EW Deutsch, GS Omenn, DS Campbell, Z Sun, JA Bletz, ...
Molecular & cellular proteomics 10 (9), 2011
5002011
Proteome-wide cellular protein concentrations of the human pathogen Leptospira interrogans
J Malmström, M Beck, A Schmidt, V Lange, EW Deutsch, R Aebersold
Nature 460 (7256), 762-765, 2009
4892009
The human proteome project: current state and future direction
P Legrain, R Aebersold, A Archakov, A Bairoch, K Bala, L Beretta, ...
Molecular & cellular proteomics 10 (7), 2011
4662011
A repository of assays to quantify 10,000 human proteins by SWATH-MS
G Rosenberger, CC Koh, T Guo, HL Röst, P Kouvonen, BC Collins, ...
Scientific data 1 (1), 1-15, 2014
4292014
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